| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 15385 = | 35 (0.580) | 10 (0.170) | 8/96 | NT | 23.7% | intergenic (+87/+60) | dnaJ/mokC | chaperone Hsp40, co‑chaperone with DnaK/regulatory protein for HokC, overlaps CDS of hokC |
| ? | minE | = 1570889 | 30 (0.510) | intergenic (+26/+210) | nupC/alaX | nucleoside (except guanosine) transporter/tRNA‑Ala | |||||
GGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGCACACAAATAATAAGTTTATTCGCATCGCG > minE/1570821‑1570954 | ggTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAat < 1:1863888‑M2/71‑3 (MQ=255) gTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAag < 1:2555906/70‑1 (MQ=255) gTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAa > 1:637572‑M2/1‑68 (MQ=255) gTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAa > 1:2264853‑M2/1‑68 (MQ=255) tGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAagag < 1:625577/71‑1 (MQ=255) tGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAagag < 1:2959518/71‑1 (MQ=255) gAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAagag > 1:2085749/1‑70 (MQ=255) gtgtGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTa < 1:2414106/70‑1 (MQ=255) gtgtGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTa < 1:548346/70‑1 (MQ=255) tgtgCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAa > 1:449428‑M2/1‑63 (MQ=255) tgtgCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAa > 1:2464180‑M2/1‑63 (MQ=255) tgCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTacac < 1:1365413/70‑1 (MQ=255) gCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAattcccataag < 1:1957464‑M2/71‑12 (MQ=255) cTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACactac > 1:1103551/1‑71 (MQ=255) tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAa > 1:2597598‑M2/1‑56 (MQ=255) tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTActct < 1:1693137/71‑1 (MQ=255) tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTActct < 1:2542013/71‑1 (MQ=255) tGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAaga > 1:532199/1‑57 (MQ=255) gTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTa < 1:76532/57‑1 (MQ=255) tCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCTGGGATAa > 1:4107200‑M2/1‑50 (MQ=255) tCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAa > 1:340180‑M2/1‑50 (MQ=255) tCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTg < 1:404578/70‑1 (MQ=255) cAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGAt > 1:2539755/1‑71 (MQ=255) aTCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTacac < 1:571362/56‑1 (MQ=255) tCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGTGATAa > 1:3822189‑M2/1‑46 (MQ=255) tCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTa < 1:641002/52‑1 (MQ=255) cGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTac > 1:79738/1‑52 (MQ=255) cGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTac > 1:2745636/1‑52 (MQ=255) gcagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTg < 1:3453625/64‑1 (MQ=255) tGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAattcccataagcgctaacttaagggttgtggtat < 1:1449256‑M2/71‑35 (MQ=255) ggTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTa < 1:3652984/42‑1 (MQ=255) gTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAgg < 1:4077797/70‑1 (MQ=255) gTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAg < 1:2992498/69‑1 (MQ=255) tGCTGTAAGACCATACATAAAAAAGCCGGGGATAattcccataagcgctaacttaagggttgtggtattac < 1:1164800‑M2/71‑38 (MQ=255) tGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGca > 1:1984473/1‑71 (MQ=255) tAAGACCATACATAAAAAAGCCGGGGATAattcccataagcgctaacttaagggttgtggtattacgcct > 1:1726692‑M2/1‑29 (MQ=255) tAAGACCATACATAAAAAAGCCGGGGATAattcccataagcgctaacttaagggttgtggtattacgcct > 1:903766‑M2/1‑29 (MQ=255) tAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCg < 1:2020140/53‑1 (MQ=255) tAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCg < 1:1960399/53‑1 (MQ=255) aGACCATACATAAAAAAGCCGGGGATAattcccataagcgctaacttaagggttgtggtattacgcc < 1:961605‑M2/67‑41 (MQ=255) aGACCATACATAAAAAAGCCGGGGATAAGAGTACACTActc > 1:1838495/1‑41 (MQ=255) ccATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGCACACAaataat < 1:1863746/71‑1 (MQ=255) catacataAAAAAGCCGGGGATAattcccataagcgctaacttaagggttgtgg > 1:2678584‑M2/1‑23 (MQ=255) catacataAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGttt < 1:254817/53‑1 (MQ=255) catacataAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAgg < 1:458013/58‑1 (MQ=255) tacataAAAAAGCCGGGGATAattcccataagcgctaacttaagggttgtggtattacgcctgatatgatt < 1:2336033‑M2/71‑51 (MQ=255) acataAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGc > 1:2661230/1‑56 (MQ=255) cataAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGAt > 1:597559/1‑41 (MQ=255) cataAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGCACACAAATAATAAg > 1:483695/1‑69 (MQ=255) cataAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGCACACAAATAATAAGtt > 1:2067356/1‑71 (MQ=255) ataAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGCACACAAATAATAAGtt > 1:2071410/1‑70 (MQ=255) taAAAAAGCCGGGGATAattcccataagcgctaacttaagggttgtggtattacgcctga > 1:3364167‑M2/1‑17 (MQ=255) taAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGCACACAAATAATAAGTTTa > 1:315576/1‑71 (MQ=255) aaaaGCCGGGGATAAGAGTACACTACTCTCACTGATCTGGGTTTTCAGGCACACAAATAATAAGtt > 1:4007234/1‑66 (MQ=255) aaaGCCGGGGATAAGAGTACACTACTCTCACTGAt > 1:2283737/1‑35 (MQ=255) aaGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCa > 1:436032/1‑45 (MQ=255) cGGGGAGTaatcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgat > 1:1108840‑M2/1‑8 (MQ=255) gggATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGCACACAAATAATAAGTTTATTCGCATcgcg < 1:1253627/71‑1 (MQ=255) gggATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGCACACAAATAATAAGTTTATTCGCATcgcg < 1:3559186/71‑1 (MQ=255) gATAattcccataagcgctaacttaagggttgtgg > 1:735675‑M2/1‑4 (MQ=255) | GGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGAGTACACTACTCTCACTGATCGGGGTTTTCAGGCACACAAATAATAAGTTTATTCGCATCGCG > minE/1570821‑1570954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |