| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 18241 | 73 (1.220) | 17 (0.280) | 14/98 | NT | 23.1% | intergenic (+80/+252) | nhaR/rpsT | DNA‑binding transcriptional activator/30S ribosomal subunit protein S20 |
| ? | minE | 1502766 = | 40 (0.670) | intergenic (‑139/‑781) | lrhA/yfbQ | DNA‑binding transcriptional repressor/predicted aminotransferase | |||||
TTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCA > minE/1502697‑1502835 | ttGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTa > 1:2743132/1‑70 (MQ=255) tgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCg < 1:1788753/70‑1 (MQ=255) tgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGa > 1:779442/1‑71 (MQ=255) cgtCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACt > 1:1755393/3‑71 (MQ=255) ccTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggta < 1:778763/71‑4 (MQ=255) cTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggta < 1:760042/70‑4 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTcac < 1:3735566‑M2/15‑1 (MQ=255) ccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTcaca > 1:3697120/1‑71 (MQ=255) ccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGAATATGAGTTGCACTAAAAAAGCGACTcaca < 1:3314481/71‑1 (MQ=255) ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACAt > 1:951699‑M2/55‑71 (MQ=255) tGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggt < 1:4027860/64‑3 (MQ=255) ggCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTg > 1:599407/1‑71 (MQ=255) gCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGt < 1:2039757/71‑1 (MQ=255) cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccaaaaaa > 1:2071547‑M2/51‑56 (MQ=255) tttCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGa > 1:3953136/1‑57 (MQ=255) ttCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGt > 1:3980163/1‑71 (MQ=255) tCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGt > 1:334249/1‑70 (MQ=255) tCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGt > 1:728928/1‑70 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGa > 1:2901811‑M2/45‑54 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTta > 1:1046246‑M2/45‑71 (MQ=255) ccGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATaa > 1:3509022/1‑71 (MQ=255) ccGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATaa > 1:2196647/1‑71 (MQ=255) cGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAAt > 1:176888/1‑71 (MQ=255) ggAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTtat < 1:3633860/67‑1 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATg < 1:3998203‑M2/32‑1 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGcc > 1:3263855‑M2/38‑71 (MQ=255) aaCCCGGACGAAAGTAAAAATGCATATGAGTTGCACTaaaaaa > 1:2421651/1‑43 (MQ=255) cccGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTg < 1:3202514/71‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTcaca < 1:2011908‑M2/16‑1 (MQ=255) ccGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGa < 1:1988199/71‑1 (MQ=255) catacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTta < 1:1318391‑M2/27‑1 (MQ=255) ggACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCg > 1:1518423/1‑56 (MQ=255) atacactaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTta > 1:3113359‑M2/33‑59 (MQ=255) cGAAAGTAAAAATGCATATGAGTTGCACTaaaaaa > 1:3523113/1‑35 (MQ=255) cGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGt > 1:2257704/1‑49 (MQ=255) actaaatcagtaagttggcagcatcaccAAAAAAGCGACTcac < 1:4083415‑M2/15‑1 (MQ=255) actaaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGt > 1:4077249‑M2/29‑48 (MQ=255) aaatcagtaagttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTtat > 1:2289922‑M2/26‑53 (MQ=255) aGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTcac > 1:2147524/1‑40 (MQ=255) atcagtaatttggcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:2393950‑M2/44‑1 (MQ=255) aaaaaTGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAAt > 1:806525/1‑53 (MQ=255) aaaaaTGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATca > 1:2011180/1‑68 (MQ=255) aaTGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGaa < 1:2924862/70‑1 (MQ=255) aagttggcagcaaaaccAAAAAAGCGACTCACATTGTTCCGTtat < 1:826705‑M2/28‑1 (MQ=255) atatGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAg < 1:355984/53‑1 (MQ=255) tatGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCt < 1:423389/71‑1 (MQ=255) atGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCtt > 1:390715/1‑71 (MQ=255) tGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCtt < 1:1972845/70‑1 (MQ=255) tGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCtt < 1:4019619/70‑1 (MQ=255) gcagcatcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCtt < 1:3279455‑M2/59‑1 (MQ=255) aGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCtt < 1:2543639/68‑1 (MQ=255) gTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg < 1:4119584/50‑1 (MQ=255) gTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt > 1:1381565/1‑52 (MQ=255) gTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAatatat > 1:3686458/1‑64 (MQ=255) ttGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGa < 1:3954303/44‑1 (MQ=255) ttGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:584414/51‑1 (MQ=255) ttGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCa < 1:2983342/68‑1 (MQ=255) catcaccAAAAAAGCGACTCACATTGTTCCGTtat < 1:3764484‑M2/28‑1 (MQ=255) tcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAg < 1:3370836‑M2/49‑1 (MQ=255) tcaccAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAg < 1:277882‑M2/49‑1 (MQ=255) gCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATcaca > 1:3819724/1‑53 (MQ=255) gCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATcaca > 1:3439769/1‑53 (MQ=255) gCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGa < 1:3907927/70‑1 (MQ=255) gCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGa < 1:2098160/70‑1 (MQ=255) gCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGAt > 1:152756/1‑71 (MQ=255) gCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGAt > 1:239383/1‑71 (MQ=255) accAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTg < 1:3947137‑M2/36‑1 (MQ=255) accAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:3440966‑M2/4‑71 (MQ=255) aCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg < 1:780677/71‑1 (MQ=255) aCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg < 1:1893712/71‑1 (MQ=255) cTAAAAAAGCGACTCACATTGTTCCGTTATAATGcc < 1:1627372/36‑1 (MQ=255) cTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAg < 1:595831/51‑1 (MQ=255) tAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAg < 1:3321317/40‑1 (MQ=255) tAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAg < 1:1088176/63‑1 (MQ=255) tAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg < 1:49964/69‑1 (MQ=255) cAAAAAAGCGACTCACATTGTTCCGTTATAATGACTGAAGt > 1:3194664‑M2/2‑41 (MQ=255) aaaaaaGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGaa < 1:1041460/51‑1 (MQ=255) aaaaaaGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCa > 1:2226768/1‑70 (MQ=255) aaaaaaGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCAAAGAATATATCTTCAGGGATCGCa > 1:2524658/1‑70 (MQ=255) aaaaaaGCGACTCACAATGTTCCGTTATAATGCCTGAAGTAg > 1:1819791/1‑42 (MQ=255) | TTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCA > minE/1502697‑1502835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |