| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1611756 | 2 (0.040) | 30 (0.550) +A |
11/100 | NT | 49.7% | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | minE | 2083040 = | 60 (1.080) | coding (66/663 nt) | yqjA | conserved inner membrane protein | |||||
CATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1611689‑1611756‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCGATGATTGGCATGTTGTA > minE/2083040‑2083060 | CATCCTTAAACTGATATACATTGCCGAAGAATGTGGTCTTTAGTTTCATAAGTCGTTCCATCAGGAAGAA < 1:3165997/70‑1CATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAA < 1:850171/70‑1CATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAA < 1:837990/70‑1CATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAA < 1:3109452/70‑1CATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAA < 1:1841632/70‑1 CTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGAT > 1:126714/1‑71 TAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGA > 1:383304/1‑71 TAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGA > 1:2960714/1‑71 AAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGAT > 1:2463777/1‑71 AAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGAT > 1:2385693/1‑71 AAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATG < 1:676243/69‑1 TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGA < 1:1317645/58‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATC < 1:117879/59‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATC < 1:342293/59‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATT < 1:1272120/63‑1 ACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAAT > 1:2931088/1‑54 ctTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt < 1:834262/68‑2 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt < 1:2142863/70‑2 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt > 1:130946/1‑69 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt < 1:600542/70‑2 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGA > 1:3237903/1‑59 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTtca > 1:3302954/1‑68 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt < 1:1579975/68‑2 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGA > 1:1870208/1‑55 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGA > 1:3245714/1‑55 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGA > 1:3165914/1‑55 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGA > 1:1535506/1‑55 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt < 1:2685828/63‑2 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAA < 1:3139879/44‑1 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAA < 1:1306979/44‑1 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAA < 1:2577548/44‑1 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAA < 1:1256140/44‑1 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAA < 1:3261770/44‑1 CAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTtca > 1:1039882/1‑59 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt < 1:1546438/57‑2 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT < 1:654233/49‑1 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGAT < 1:319161/39‑1 TTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt < 1:3191290/50‑2 TTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTt < 1:1293908/50‑2 TTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGAT < 1:1727631/37‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGA > 1:2872631/1‑37 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT < 1:754973/41‑1 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAT < 1:2539295/41‑1 TTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCA < 1:1689288/40‑1 | CATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1611689‑1611756‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCGATGATTGGCATGTTGTA > minE/2083040‑2083060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |