| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1611756 | 2 (0.040) | 30 (0.550) +A |
11/100 | NT | 49.7% | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | minE | 2083040 = | 60 (1.080) | coding (66/663 nt) | yqjA | conserved inner membrane protein | |||||
CATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATA > minE/1611689‑1611824 | cATCCTTAAACTGATATACATTGCCGAAGAATGTGGTCTTTAGTTTCATAAGTCGTTCCATCAGGAAGaa < 1:3165997‑M1/70‑3 (MQ=255)cATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaa < 1:1841632‑M1/70‑3 (MQ=255)cATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaa < 1:837990‑M1/70‑3 (MQ=255)cATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaa < 1:850171‑M1/70‑3 (MQ=255)cATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaa < 1:3109452‑M1/70‑3 (MQ=255) cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat > 1:126714‑M1/1‑64 (MQ=255) tAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga > 1:2960714‑M1/1‑62 (MQ=255) tAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga > 1:383304‑M1/1‑62 (MQ=255) aaaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgat > 1:2463777‑M1/1‑61 (MQ=255) aaaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgat > 1:2385693‑M1/1‑61 (MQ=255) aaaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatg < 1:676243‑M1/69‑9 (MQ=255) tGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGa < 1:1317645‑M1/58‑2 (MQ=255) atatACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatc < 1:342293‑M1/59‑5 (MQ=255) atatACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatc < 1:117879‑M1/59‑5 (MQ=255) taCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgatt < 1:1272120‑M1/63‑12 (MQ=255) aCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaat > 1:2931088‑M1/1‑51 (MQ=255) ctttgcCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt < 1:834262‑M1/68‑21 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt < 1:600542‑M1/70‑21 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt < 1:2142863‑M1/70‑21 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt > 1:130946‑M1/1‑50 (MQ=255) cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga > 1:3237903‑M1/1‑50 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca > 1:3302954‑M1/1‑49 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt < 1:1579975‑M1/68‑21 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga > 1:1870208‑M1/1‑46 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga > 1:3245714‑M1/1‑46 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga > 1:3165914‑M1/1‑46 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga > 1:1535506‑M1/1‑46 (MQ=255) gAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt < 1:2685828‑M1/63‑21 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaa < 1:1256140‑M1/44‑3 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaa < 1:3261770‑M1/44‑3 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaa < 1:2577548‑M1/44‑3 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaa < 1:1306979‑M1/44‑3 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaa < 1:3139879‑M1/44‑3 (MQ=255) cAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcatttttca > 1:1039882‑M1/1‑40 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCaggaag < 1:1512380/37‑1 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt < 1:1546438‑M1/57‑21 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcat < 1:654233‑M1/49‑17 (MQ=255) tCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:319161‑M1/39‑8 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt < 1:3191290‑M1/50‑21 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcattttt < 1:1293908‑M1/50‑21 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgat < 1:1727631‑M1/37‑8 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGaatcgatga > 1:2872631‑M1/1‑28 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcat < 1:754973‑M1/41‑17 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggcat < 1:2539295‑M1/41‑17 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGaatcgatgattggca < 1:1689288‑M1/40‑16 (MQ=255) ttCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCa < 1:2783822/67‑1 (MQ=255) cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAGGAGGCGTACCAATGTc > 1:2441827/1‑71 (MQ=255) gaaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa > 1:1724736/1‑70 (MQ=255) aaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGata < 1:867575/71‑1 (MQ=255) aaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGata < 1:430297/71‑1 (MQ=255) aaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGata < 1:281862/71‑1 (MQ=255) aaggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGata < 1:1454119/71‑1 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGata > 1:749046/1‑70 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa < 1:434188/68‑1 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa > 1:646813/1‑68 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa > 1:3024399/1‑68 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa < 1:2920047/68‑1 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa > 1:2086356/1‑68 (MQ=255) aggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGa < 1:1569582/68‑1 (MQ=255) ggaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAgg < 1:1852704/53‑1 (MQ=255) | CATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATA > minE/1611689‑1611824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |