| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 169029 | 76 (0.930) | 10 (0.140) | 3/84 | NT | 10.4% | coding (1546/2244 nt) | fhuA | ferrichrome outer membrane transporter |
| ? | AP009048 | = 169050 | 108 (1.550) | coding (1567/2244 nt) | fhuA | ferrichrome outer membrane transporter | |||||
CAAGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/168954‑169029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgttaCACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGGTCGT < AP009048/169050‑168981 CAAGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGG > 1:1278969/1‑71 AAGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGT > 1:5906041/1‑71 AAGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGG < 1:6577796/70‑1 AAGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGG < 1:7898214/70‑1 AGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTG > 1:5554837/1‑71 AGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTG > 1:3405544/1‑71 AGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTG > 1:3998120/1‑71 GAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGT > 1:4738867/1‑69 GAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGT > 1:4377803/1‑69 AATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTT < 1:4933553/71‑1 AATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGT > 1:6315328/1‑70 TAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTA < 1:4929604/65‑1 TAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTA < 1:4026605/65‑1 TAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTA < 1:3530079/65‑1 GCGTTGACGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGT > 1:4749167/1‑56 ACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTT > 1:1530330/1‑48 ACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTT > 1:262142/1‑48 CCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTACACCATTATCAAACAGGTAGTTAACA > 1:6557978/1‑71 CCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTACACCATTATCAAACAGGTAGTTAACA > 1:1051382/1‑71 CCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTACACCATTATCAAACAGGTAGTTAACA < 1:6700737/71‑1 CCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTACACCATTATCAAACAGGTAGTTAACA > 1:1112766/1‑71 GATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTA < 1:7801760/43‑1 GATAAACGTGATGACAAACAGTTTACCTGGCGTGGTG < 1:3901874/37‑1 GATAAACGTGATGACAAACAGTTTACCTGGCGTGGTG < 1:6814581/37‑1 GATAAACGTGATGACAAACAGTTTACCTGGCGTGGTG < 1:7119008/37‑1 GATAAACGTGATGACAAACAGTTTACCTGGCGTGGTG < 1:6146616/37‑1 ACAAACAGTTTACCTGGCGTGGTGGTGTTACACCATTATCAAACAGGTAGTTA < 1:6585405/53‑1 ACAAACAGTTTACCTGGCGTGGTGGTGTTACACCATTATCAAACAGGTAGTTA < 1:3394196/53‑1 ACAAACAGTTTACCTGGCGTGGTGGTGTTACACCATTATCAAACAGGTAGTTA < 1:2611779/53‑1 ACAAACAGTTTACCTGGCGTGGTGGTGTTACACCATTATCAAACAGGTAGTTA < 1:4848360/53‑1 ACAAACAGTTTACCTGGCGTGGTGGTGTTACACCATTATCAAACAGGTAGTTA < 1:7604316/53‑1 CAAACAGTTTACCTGGCGTGGTGGTGTTACACCATTATCAAACAGGTAGTTAACA < 1:3522683/55‑1 GTGTTACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTTTCATCACGTTTATCG < 1:5258550/71‑1 GTGTTACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCG < 1:936605/71‑1 GTGTTACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCG < 1:388043/71‑1 TGTTACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGG > 1:5034714/1‑71 TGTTACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTC < 1:5850043/57‑1 TTACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGGTC > 1:7854042/1‑71 TTACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTT < 1:5784663/51‑1 TTACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTT < 1:1671801/51‑1 TTACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTT < 1:5794249/51‑1 TTACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAA < 1:1936354/45‑1 TTACACCATTATCAAACAGGTAGTTAACACCACCACG > 1:6117545/1‑37 TTACACCATTATCAAACAGGTAGTTAACACCACCACG > 1:7525182/1‑37 TACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGGTCG > 1:4707313/1‑71 ACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGGTCGT > 1:2589249/1‑71 ACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGGTCGT > 1:888555/1‑71 ACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGGTC > 1:2007755/1‑69 ACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGG > 1:322118/1‑67 ACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGG > 1:3979762/1‑67 ACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGG > 1:555583/1‑67 ACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCA > 1:1291933/1‑54 ACACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAAC > 1:1071320/1‑45 ACACCATTATCAAACAGGAAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGGTC > 1:7820033/1‑69 CAAGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/168954‑169029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgttaCACCATTATCAAACAGGTAGTTAACACCACCACGCCAGGTAAACTGTTTGTCATCACGTTTATCGGTCGT < AP009048/169050‑168981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |