| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 871374 | 66 (0.810) | 6 (0.080) | 3/86 | NT | 9.4% | intergenic (+3/‑15) | yliB/yliC | predicted peptide transporter subunit/predicted peptide transporter subunit |
| ? | AP009048 | = 871389 | 58 (0.810) | coding (1/921 nt) | yliC | predicted peptide transporter subunit | |||||
GTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/871301‑871374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taagcaTTCCACTCCCTGCGTTGCTTATTGCAAATCCGCGTCTTCAAAGCTGAAGCCGGTGTCTGGCATGATCC < AP009048/871389‑871322 GTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAAT < 1:7036917/69‑1 TAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAG > 1:2602673/1‑71 TAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAG > 1:6623332/1‑71 AAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGC < 1:1434514/70‑1 AAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGC > 1:2949207/1‑70 AAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGC > 1:6662811/1‑70 ACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGC > 1:1273197/1‑62 GGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCATTCCACTCCCTGCGTTGCTTATT > 1:2793945/1‑59 GGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCATTCCACTCCCTGCGTTGCTTATT > 1:7802236/1‑59 CTTCAGCTTTGAAGACGCGGATTTGCAATAAGCATTCCACTCCCTGCGTTGCTTATT > 1:4497109/1‑57 CTTCAGCTTTGAAGACGCGGATTTGCAATAAGCATTCCACTCCCTGCGTTGCTTATT > 1:5500989/1‑57 CTTCAGCTTTGAAGAAGCGGATTTGCAATAAGCATTTCACTCCCTGCGTTGCTTATT > 1:2740273/1‑57 TTCAGCTTTGAAGACGCGGATTTGCAATAAGCATTCCACTCCCTGCGTTGCTTATTG > 1:2568285/1‑57 TAAGCATTCCACTCCCTGCGTTGCTTATTGCAAATCCGCGTCTTCAAAGCTGAAGCCGGTGTCTGGCATGA > 1:786770/1‑71 GCATTCCACTCCCTGCGTTGCTTATTGCAAATCCGCGTCTTCAAAGCTGAAGCCGGTGTCTGGCATGATCC < 1:5223535/71‑1 GCATTCCACTCCCTGCGTTGCTTATTGCAAATCCGCGTCTTCAAAGCTGAAGCCGGTG < 1:4498538/58‑1 ATTCCACTCCCTGCGTTGCTTATTGCAAATCCGCGTCTTCAAA < 1:4565485/43‑1 GTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/871301‑871374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taagcaTTCCACTCCCTGCGTTGCTTATTGCAAATCCGCGTCTTCAAAGCTGAAGCCGGTGTCTGGCATGATCC < AP009048/871389‑871322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |