| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 981359 | 75 (0.920) | 4 (0.060) | 3/84 | NT | 5.3% | intergenic (+151/‑110) | mukB/ycbB | fused chromosome partitioning proteins/predicted carboxypeptidase |
| ? | AP009048 | = 981367 | 80 (1.150) | intergenic (+159/‑102) | mukB/ycbB | fused chromosome partitioning proteins/predicted carboxypeptidase | |||||
GCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/981284‑981359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcctgTTACTCATCAGGCTTATCTTCAGTATATAAACGCCGATACGTTTTTACATAACCTAATGTAAAGAAGTT < AP009048/981367‑981299 GCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAA < 1:2332366/71‑1GCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAA < 1:5554713/71‑1 CTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCT > 1:1634854/1‑70 TTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTG > 1:1355137/1‑70 AAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATA > 1:7230914/1‑56 AAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATA > 1:551128/1‑56 TCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTG > 1:6587775/1‑57 TTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGACAAGCCTGTTAC < 1:1379542/59‑1 TACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGTTACTCATCAGGCTT < 1:4219610/68‑1 ACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGTTACTCATCAGGCTTATCT > 1:726431/1‑71 ACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGTTACTCATCAGGCTTATCT > 1:4071052/1‑71 AAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGTTACTCATCAGGC > 1:1496828/1‑50 AAACGTATCGGCGTTTATATACTGAAGATAAGCCT < 1:6069730/35‑1 AAGCCTGTTACTCATCAGGCTTATCTTCAGTATATAAACGCCGATACGTTTTTACATAACCTAATGTAAAG < 1:1099674/71‑1 AAGCCTGTTACTCATCAGGCTTATCTTCAGTATATAAACGCCGATACGTTTTTACATAACCTAATGTAAA < 1:7837293/70‑1 AGCCTGTTACTCATCAGGCTTATCTTCAGTATATAAACGCCGATACGTTTTTACATAACCTAATGTAAAGA < 1:1093340/71‑1 CTGTTACTCATCAGGCTTATCTTCAGTATATAAACGCCGATACGTTTTTACATAACCTAATGTAAAGAAGT < 1:3087379/71‑1 CTGTTACTCATCAGGCTTATCTTCAGTATATAAACGC > 1:3904840/1‑37 TGTTACTCATCAGGCTTATCTTCAGTATATAAACGCCGATACGTTTTTACATAACCTAATGTAAAGAAGTT > 1:145265/1‑71 GTTACTCATCAGGCTTATCTTCAGTATATAAACGCCGATACGTTTTTACATAAC > 1:3798260/1‑54 GTTACTCATCAGGCTTATCTTCAGTATATAAACGCCGATAC < 1:1058749/41‑1 GCGCGCTTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/981284‑981359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcctgTTACTCATCAGGCTTATCTTCAGTATATAAACGCCGATACGTTTTTACATAACCTAATGTAAAGAAGTT < AP009048/981367‑981299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |