| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 981359 | 75 (0.920) | 4 (0.060) | 3/84 | NT | 5.3% | intergenic (+151/‑110) | mukB/ycbB | fused chromosome partitioning proteins/predicted carboxypeptidase |
| ? | AP009048 | = 981367 | 80 (1.150) | intergenic (+159/‑102) | mukB/ycbB | fused chromosome partitioning proteins/predicted carboxypeptidase | |||||
Only 100 of 119 total aligned reads displayed.
TTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATAACA > AP009048/981290‑981428 | ttttCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCtga > 1:3423465/1‑71 (MQ=255)ttttCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCtga > 1:2621483/1‑71 (MQ=255)ttttCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTG > 1:1355137‑M1/1‑70 (MQ=255)ttttCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTAACGGCGTTTATAAACTGAAGATAAGCAtga > 1:6466123/1‑71 (MQ=255) ttCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCtgat > 1:494077/1‑70 (MQ=255) ttCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCtgat > 1:4700185/1‑70 (MQ=255) ttCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCtgat > 1:6900194/1‑70 (MQ=255) ttCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCtgat > 1:6951562/1‑70 (MQ=255) ttCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCtgat > 1:716717/1‑70 (MQ=255) ttCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCtga > 1:7423750/1‑69 (MQ=255) cTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAg > 1:103902/1‑71 (MQ=255) tAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCtga > 1:4293958/1‑64 (MQ=255) aaCTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAAca > 1:145265‑M2/1‑69 (MQ=255) aCTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAAcag < 1:3087379‑M2/71‑4 (MQ=255) tcttTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAAcaggct < 1:1093340‑M2/71‑7 (MQ=255) tcttTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTG > 1:6587775‑M1/1‑57 (MQ=255) cttTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAAcaggctt < 1:1099674‑M2/71‑8 (MQ=255) tttACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAAcaggctt < 1:7837293‑M2/70‑8 (MQ=255) tACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGttactcatcaggctt < 1:4219610‑M1/68‑16 (MQ=255) cATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCg > 1:5110469/1‑71 (MQ=255) aTTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGt > 1:2933834/1‑71 (MQ=255) aTTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGt > 1:2804807/1‑71 (MQ=255) tAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCa > 1:2450358/1‑71 (MQ=255) tAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCa > 1:1389260/1‑71 (MQ=255) tAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCa > 1:1337895/1‑71 (MQ=255) aGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCa > 1:1805462/1‑70 (MQ=255) gTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGt > 1:6614956/1‑51 (MQ=255) aTGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACtt < 1:4575212/70‑1 (MQ=255) tGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACt < 1:2182942/68‑1 (MQ=255) tGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTc > 1:2659319/1‑71 (MQ=255) gTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCg > 1:3904708/1‑71 (MQ=255) tAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTa < 1:5024997/46‑1 (MQ=255) tAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCg < 1:7233679/70‑1 (MQ=255) aaaaCGTATCGGCGTTTATATACTGAAGATAAGCCTGttactcatcaggc > 1:1496828‑M1/1‑37 (MQ=255) aaaaCGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCa > 1:6476205/1‑60 (MQ=255) aaaCGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAg > 1:4317317/1‑71 (MQ=255) cGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTAt < 1:2307226/71‑1 (MQ=255) gTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAAc < 1:1058749‑M2/41‑2 (MQ=255) gTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTAtt > 1:1275449/1‑71 (MQ=255) gTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTAtt > 1:4910032/1‑71 (MQ=255) gTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTAtt > 1:5493503/1‑71 (MQ=255) tCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTgg < 1:3045391/70‑1 (MQ=255) cGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTAtt < 1:750992/67‑1 (MQ=255) cGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTAtt < 1:7374247/67‑1 (MQ=255) ggCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCa > 1:6238703/1‑50 (MQ=255) ggCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGt > 1:4919349/1‑71 (MQ=255) gCGTTTATATACTGAAGATAAGCCTGATGAGTAAcag > 1:3904840‑M2/1‑34 (MQ=255) gCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGtt > 1:640250/1‑71 (MQ=255) gCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGtt < 1:309714/71‑1 (MQ=255) cGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTg < 1:195961/71‑1 (MQ=255) gTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATAc > 1:1544912/1‑50 (MQ=255) gTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATAc > 1:1011338/1‑50 (MQ=255) gTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATAc > 1:7200705/1‑50 (MQ=255) gTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATAc > 1:5368035/1‑50 (MQ=255) tttATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTc < 1:6235647/53‑1 (MQ=255) ttATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTa > 1:3556401/1‑70 (MQ=255) ttATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTa > 1:6302289/1‑70 (MQ=255) tatataCTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTa > 1:3274983/1‑58 (MQ=255) tatataCTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTa > 1:5340212/1‑69 (MQ=255) tatataCTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTa > 1:837141/1‑69 (MQ=255) tatataCTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTa > 1:6152191/1‑69 (MQ=255) ataCTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAg > 1:1258129/1‑53 (MQ=255) taCTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGtt > 1:489538/1‑62 (MQ=255) taCTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGtt > 1:2555071/1‑62 (MQ=255) aCTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTa > 1:4590215/1‑64 (MQ=255) aCTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCa > 1:2431863/1‑70 (MQ=255) cTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAg < 1:1400280/50‑1 (MQ=255) cTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAg < 1:540715/50‑1 (MQ=255) tGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGt > 1:332367/1‑71 (MQ=255) gAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTg < 1:7880856/53‑1 (MQ=255) gAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAg < 1:371344/69‑1 (MQ=255) aaGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCg > 1:479813/1‑43 (MQ=255) aaGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCg > 1:2794371/1‑43 (MQ=255) aaGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCg > 1:6567481/1‑43 (MQ=255) aaGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTAc < 1:7653662/61‑1 (MQ=255) aaGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTAc < 1:4065287/61‑1 (MQ=255) aGATAAGCCTGATGAGTAAcaggcttatcttcagtatataaacgccgatacgtttttacataacctaatgt > 1:4071052‑M2/1‑19 (MQ=255) aGATAAGCCTGATGAGTAAcaggcttatcttcagtatataaacgccgatacgtttttacataacctaatgt > 1:726431‑M2/1‑19 (MQ=255) aGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCg > 1:186679/1‑70 (MQ=255) gATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTa < 1:2060087/58‑1 (MQ=255) aTAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTg < 1:6893692/42‑1 (MQ=255) aTAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTgg < 1:6755547/50‑1 (MQ=255) tAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTaaa < 1:6733398/71‑1 (MQ=255) aaGCCTGttactcatcaggcttatcttcagtatataaacgccgatacgtttttacataacctaatgtaaa < 1:7837293‑M1/70‑64 (MQ=255) aaGCCTGATGAGTAAcaggcttatcttcagtatataaacgccgatacgtttttacataacctaatgta < 1:4219610‑M2/68‑54 (MQ=255) aaGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCg < 1:1505161/50‑1 (MQ=255) aaGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTaaaa > 1:7000583/1‑71 (MQ=255) aGCCTGttactcatcaggcttatcttcagtatataaacgccgatacgtttttacataacctaatgtaaaga < 1:1093340‑M1/71‑66 (MQ=255) aGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAAt < 1:6060210/71‑1 (MQ=255) aGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAAt < 1:246576/71‑1 (MQ=255) gCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGtt > 1:4413448/1‑50 (MQ=255) gCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGtt > 1:7545433/1‑50 (MQ=255) gCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTAc < 1:4688536/54‑1 (MQ=255) cTGttactcatcaggcttatcttcagtatataaacgccgatacgtttttacataacctaatgtaaagaagt < 1:3087379‑M1/71‑69 (MQ=255) cTGttactcatcaggcttatcttcagtatataaacgc > 1:3904840‑M1/1‑3 (MQ=255) cTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATAAc < 1:3895421/71‑1 (MQ=255) tgatgaGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACa > 1:5609130/1‑52 (MQ=255) tGttactcatcaggcttatcttcagtatataaacgccgatacgtttttacataacctaatgtaaagaagtt > 1:145265‑M1/1‑2 (MQ=255) gttactcatcaggcttatcttcagtatataaacgccgatacgtttttacataac > 1:3798260‑M1/1‑1 (MQ=255) gttactcatcaggcttatcttcagtatataaacgccgatac < 1:1058749‑M1/41‑41 (MQ=255) | TTTTCTTTAAACTTCTTTACATTAGGTTATGTAAAAACGTATCGGCGTTTATATACTGAAGATAAGCCTGATGAGTAACAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATAACA > AP009048/981290‑981428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |