| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 1227720 | 77 (0.950) | 10 (0.150) | 4/80 | NT | 12.5% | intergenic (‑63/‑457) | minC/ycgJ | cell division inhibitor/hypothetical protein |
| ? | AP009048 | = 1227726 | 77 (1.160) | intergenic (‑69/‑451) | minC/ycgJ | cell division inhibitor/hypothetical protein | |||||
GGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/1227644‑1227720‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agactataaCATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCTAATTGAGTAAGGCCAG < AP009048/1227726‑1227659 GGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAG < 1:781313/70‑1 GCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGAC < 1:3430187/71‑1 CGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACT < 1:696832/71‑1 CGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACT < 1:2525546/71‑1 GTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTA < 1:788119/71‑1 GTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTA < 1:7140646/71‑1 TGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTAT < 1:4490652/71‑1 TGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTA > 1:2199684/1‑70 TTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATA < 1:6059218/70‑1 TGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGA > 1:3541081/1‑63 TCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAA > 1:6395262/1‑64 ACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAACATGCCTTATAGTCTTC > 1:5762854/1‑71 ACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAACATGCCTTATAGTC > 1:2559268/1‑68 ACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAACATGCCTTATAGTC > 1:2372957/1‑68 TCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTA > 1:1856880/1‑49 TCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTA > 1:644418/1‑49 AATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGAC > 1:7280658/1‑45 AATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGAC > 1:4645787/1‑45 AATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAA > 1:4028525/1‑42 AATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATA > 1:2303476/1‑38 ATCGCCAGCGCGCGATGATGTTCCGAAGACTATAACATGCCTTAT < 1:4589202/45‑1 ATCGCCAGCGCGCGATGATGTTCCGAAGACTATAACATGCCTTAT < 1:4602478/45‑1 ATCGCCAGCGCGCGATGATGTTCCGAAGACTATAACATGCCTTAT < 1:7500668/45‑1 CGCCAGCGCGCGATGATGTTCCGAAGACTATAACATGCCTTATAG > 1:1382324/1‑45 CGCCAGCGCGCGATGATGTTCCGAAGACTATAACATGCCTTATAG > 1:3453431/1‑45 CCAGCGCGCGATGATGTTCCGAAGACTATAACATGCCTTATA < 1:6595803/42‑1 CCAGCGCGCGATGATGTTCCGAAGACTATAACATGCCTTATA < 1:542855/42‑1 GACTATAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCTA > 1:6751560/1‑61 GACTATAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGA > 1:731469/1‑51 CTATAACATGCCTTATAGTCTTCGGAACATCATCGC > 1:767214/1‑36 TATAACATGCCTTATAGTCTTCGGAACATCATGGCGCG < 1:6322784/38‑1 TATAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCTAATTGAGTAAGGC > 1:6646470/1‑70 TATAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGC < 1:1379743/43‑1 TATAACATGCCTTATAGTCTTCGGAACATCATCGCGCG < 1:4644127/38‑1 TATAACATGCCTTATAGTCTTCGGAACATCATCGCGCG < 1:1497631/38‑1 TATAACATGCCTTATAGTCTTCGGAACATCATCGCGCG < 1:7295162/38‑1 TAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCTAATTGAGTAAGGCCAG < 1:3539862/71‑1 TAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCTAATTGAGTAAGGCCAG > 1:4783709/1‑71 TAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCTAATTGAGTAAGGCCAG > 1:1074962/1‑71 TAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCTAATTGAGTAAGGCCAG > 1:6270774/1‑71 TAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCTAATTGAGTAAGGCCA > 1:1990179/1‑70 TAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGC > 1:1945861/1‑54 TAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAAT > 1:6015632/1‑51 TAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAAT > 1:4984395/1‑51 TAACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAAT > 1:6330658/1‑51 AACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCTAATTGAGTAAGGCCAG > 1:6657831/1‑70 AACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAG > 1:7467763/1‑52 ACATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCT < 1:7740982/53‑1 GGCGTGTTTGACATCCTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/1227644‑1227720‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agactataaCATGCCTTATAGTCTTCGGAACATCATCGCGCGCTGGCGATGATTAATAGCTAATTGAGTAAGGCCAG < AP009048/1227726‑1227659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |