| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 1227720 | 77 (0.950) | 10 (0.150) | 4/80 | NT | 12.5% | intergenic (‑63/‑457) | minC/ycgJ | cell division inhibitor/hypothetical protein |
| ? | AP009048 | = 1227726 | 77 (1.160) | intergenic (‑69/‑451) | minC/ycgJ | cell division inhibitor/hypothetical protein | |||||
Only 100 of 125 total aligned reads displayed.
CTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATA > AP009048/1227659‑1227795 | cTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGtta > 1:1074962‑M2/1‑68 (MQ=255)cTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGtta < 1:3539862‑M2/71‑4 (MQ=255)cTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGtta > 1:4783709‑M2/1‑68 (MQ=255)cTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGtt > 1:6657831‑M2/1‑68 (MQ=255) tGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGtta > 1:1990179‑M2/1‑67 (MQ=255) gCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGttata > 1:6646470‑M2/1‑65 (MQ=255) tCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGAt > 1:6210708/1‑71 (MQ=255) aaTTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATta < 1:6506151/71‑1 (MQ=255) aaTTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATta > 1:2914006/1‑71 (MQ=255) ttAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATtata > 1:3804829/1‑71 (MQ=255) tAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGttatagtc > 1:6751560‑M2/1‑53 (MQ=255) aGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGt < 1:7740982‑M2/53‑2 (MQ=255) gCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGtta > 1:1945861‑M2/1‑51 (MQ=255) gCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATAtt < 1:1613728/70‑1 (MQ=255) cTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGtt > 1:7467763‑M2/1‑50 (MQ=255) aTTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGtta > 1:6330658‑M2/1‑48 (MQ=255) aTTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGtta > 1:4984395‑M2/1‑48 (MQ=255) aTTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGtta > 1:6015632‑M2/1‑48 (MQ=255) ttAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAg < 1:3472681/69‑1 (MQ=255) aaTCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAg > 1:2941060/1‑67 (MQ=255) atcatcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCaa < 1:5934160/70‑1 (MQ=255) tcatcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGttatagtc > 1:731469‑M2/1‑43 (MQ=255) tcatcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATtat < 1:2411149/59‑1 (MQ=255) tcatcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATtat < 1:2411147/59‑1 (MQ=255) atcGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTc < 1:4038753/70‑1 (MQ=255) cGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCAcc > 1:3943243/1‑71 (MQ=255) gCCAGCGCGCGATGATGTTCCGAAGACTATAAGTCATGTTATAGTCTGGa > 1:4680011/1‑50 (MQ=255) gCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGttata < 1:1379743‑M2/43‑6 (MQ=255) gCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGa > 1:7021474/1‑50 (MQ=255) gCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCAccc < 1:4004752/71‑1 (MQ=255) gCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCAccc < 1:2874446/71‑1 (MQ=255) gcgcgcGATGATGTTCTGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTcc > 1:2065463/1‑70 (MQ=255) cgcgcgATGATGTTCCGAAGACTATAAGGCATGttata < 1:7295162‑M2/38‑6 (MQ=255) cgcgcgATGATGTTCCGAAGACTATAAGGCATGttata < 1:4644127‑M2/38‑6 (MQ=255) cgcgcgATGATGTTCCGAAGACTATAAGGCATGttata < 1:1497631‑M2/38‑6 (MQ=255) cgcgccATGATGTTCCGAAGACTATAAGGCATGttata < 1:6322784‑M2/38‑6 (MQ=255) gcgcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGa < 1:1460308/53‑1 (MQ=255) cgcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTg < 1:5995504/41‑1 (MQ=255) cgcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTg < 1:3098596/41‑1 (MQ=255) cgcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTg < 1:6707398/41‑1 (MQ=255) gcgATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATtat < 1:7782105/46‑1 (MQ=255) gatgatGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGt < 1:7339448/56‑1 (MQ=255) gatgatGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGt < 1:7348393/56‑1 (MQ=255) gatgatGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGt < 1:5140478/56‑1 (MQ=255) gatgatGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAt < 1:4389360/71‑1 (MQ=255) atgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt < 1:6906703/71‑1 (MQ=255) atgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAt < 1:184927/70‑1 (MQ=255) tgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt > 1:6977891/1‑70 (MQ=255) tgatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTc < 1:7015429/71‑1 (MQ=255) gatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCaa > 1:5014152/1‑51 (MQ=255) gatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCaa > 1:2770119/1‑51 (MQ=255) gatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt > 1:7889554/1‑69 (MQ=255) gatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt > 1:5411107/1‑69 (MQ=255) gatgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTc > 1:3882034/1‑70 (MQ=255) atgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt > 1:6425238/1‑68 (MQ=255) atgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt > 1:6142299/1‑68 (MQ=255) tgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAg > 1:3036400/1‑50 (MQ=255) tgTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCa > 1:7521081/1‑69 (MQ=255) gTTCCGAAGACTATAAGGCATGTTATAGTCTGGATtat > 1:1613927/1‑38 (MQ=255) gTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCaa > 1:1298442/1‑48 (MQ=255) gTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCaa > 1:2099856/1‑48 (MQ=255) gTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCAccc < 1:6618993/55‑1 (MQ=255) gTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCaga < 1:6148566/70‑1 (MQ=255) tCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGc < 1:4339362/44‑1 (MQ=255) ccGAAGACTATAAGGCATGTTATAGTCTGTATTATATTGAGGCaa < 1:4047996/45‑1 (MQ=255) ccGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCaa < 1:7478520/45‑1 (MQ=255) cGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCt < 1:450834/52‑1 (MQ=255) cGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaa < 1:5457448/70‑1 (MQ=255) gAAGACTATAAGGCATGttatagtcttcggaacatcatcgcgcgctggcgatgattaatagctaattgagt > 1:5762854‑M2/1‑17 (MQ=255) gAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaaaa < 1:2747228/71‑1 (MQ=255) gAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTaaaa < 1:6465502/71‑1 (MQ=255) gAAGACTATAAGCCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTAtt < 1:3621135/61‑1 (MQ=255) aaGACTATAAGGCATGTTATAGTCTGGATTATATTg > 1:584636/1‑36 (MQ=255) aaGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGt < 1:4252487/66‑1 (MQ=255) aGACTATAAGGCGTGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGt > 1:3140097/1‑71 (MQ=255) aGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGt > 1:2121775/1‑71 (MQ=255) gACTATAAGGCATGttatagtcttcggaacatcatcgcgcgctggcgatgattaatagctaattgagt > 1:2372957‑M2/1‑14 (MQ=255) gACTATAAGGCATGttatagtcttcggaacatcatcgcgcgctggcgatgattaatagctaattgagt > 1:2559268‑M2/1‑14 (MQ=255) cTATAAGGCATGttatagtcttcggaacatcatcgcgcgctggcg > 1:3453431‑M2/1‑12 (MQ=255) cTATAAGGCATGttatagtcttcggaacatcatcgcgcgctggcg > 1:1382324‑M2/1‑12 (MQ=255) cTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTa < 1:947823/71‑1 (MQ=255) cTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTa < 1:3197321/71‑1 (MQ=255) tataAGGCATGttatagtcttcggaacatcatcgcgcgctgg < 1:6595803‑M2/42‑32 (MQ=255) tataAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCAcc < 1:5610673/43‑1 (MQ=255) ataAGGCATGttatagtcttcggaacatcatcgcgcgctggcgat < 1:7500668‑M2/45‑36 (MQ=255) ataAGGCATGttatagtcttcggaacatcatcgcgcgctggcgat < 1:4602478‑M2/45‑36 (MQ=255) taAGGCATGTTATAGTCTGGATTATATTGAGGCaa < 1:5794556/35‑1 (MQ=255) taAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTc > 1:3834874/1‑71 (MQ=255) aGGCATGTTATAGTCTGGATTATATTGAGGCAAGt > 1:4189790/1‑35 (MQ=255) aGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTc < 1:5579111/64‑1 (MQ=255) aGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCtg > 1:2899352/1‑71 (MQ=255) aGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCtg > 1:6168471/1‑71 (MQ=255) aGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCtg > 1:2077394/1‑71 (MQ=255) aGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCt < 1:2589413/70‑1 (MQ=255) aGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCt < 1:2108334/70‑1 (MQ=255) cATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGa > 1:6674456/1‑71 (MQ=255) cATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGa < 1:554514/71‑1 (MQ=255) aTGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGa > 1:6044240/1‑70 (MQ=255) gTTATAGTCTGGATTATATTGAGGCAAGTCCCCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATa > 1:6001689/1‑70 (MQ=255) gTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTc > 1:2281599/1‑58 (MQ=255) | CTGGCCTTACTCAATTAGCTATTAATCATCGCCAGCGCGCGATGATGTTCCGAAGACTATAAGGCATGTTATAGTCTGGATTATATTGAGGCAAGTCACCCTCCCATTTATTCAGAGTAAAAGTCTATTCTGTGATA > AP009048/1227659‑1227795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |