New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AP009048	= 1515970	54 (0.660)	9 (0.120)	3/90	NT	13.4%	coding (426/942 nt)	ydcU	predicted spermidine/putrescine transporter subunit
	?	AP009048	= 1515984	67 (0.900)					coding (440/942 nt)	ydcU	predicted spermidine/putrescine transporter subunit

GAAAATGAAAGCGTTTTTTTATATTGCGGTAATGTTGCCGATGTGGGCGAGCTACATTGTTAAAGCCTATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AP009048/1515898‑1515970 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccAGCAATAACGTCCAGGCATAGGCTTTAACAATGTAGCTCGCCCACATCGGCAACAT  <  AP009048/1515984‑1515929                                                                                                                                   GAAAATGAAAGCGTTTTTTTATATTGCGGTAATGTTGCCGATGTGGGCGAGCTACATTGTTAAAGCCTATG                                                            <  1:5745508/71‑1                                   TTGCCGATGTGGGCGAGCTACATTGTTAAAGCCTATGCCAGCAATAACGTCCAGGCATA                                      >  1:3156272/1‑59                                   TTGCCGATGTGGGCGAGCTACATTGTTAAAGCCTATGCCAGCAATAACGTCCAGGCATA                                      >  1:3390236/1‑59                                   TTGCCGATGTGGGCGAGCTACATTGTTAAAGCCTATGCCAGCAATAACGTCCAGGCATA                                      >  1:5686581/1‑59                                        GATGTGGGCGAGCTACATTGTTAAAGCCTATGCCAGCAATAACGTCCAG                                           <  1:1895797/49‑1                                        GATGTGGGCGAGCTACATTGTTAAAGCCTATGCCAGCAATAACGTCCAG                                           <  1:4631600/49‑1                                        GATGTGGGCGAGCTACATTGTTAAAGCCTATGCCAGCAATAACGTCCAG                                           <  1:6869205/49‑1                                          TGTGGGCGAGCTACATTGTTAAAGCCTATGCCAGCAATAACGTCCAGGC                                         >  1:3959457/1‑49                                          TGTGGGCGAGCTACATTGTTAAAGCCTATGCCAGCAATAACGTCCAGGC                                         >  1:6059512/1‑49                                          TGTGGGCGAGCTACATTGTTAAAGCCTATGCCAGCAATAACGTCCAGGC                                         >  1:6524740/1‑49                                                                         CAGCAATAACGTCCAGGCATAGGCTTTAACAATGTAGCTCGCCCACATCGGCAACAT  <  1:7787400/57‑1                                                                                                                                   GAAAATGAAAGCGTTTTTTTATATTGCGGTAATGTTGCCGATGTGGGCGAGCTACATTGTTAAAGCCTATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AP009048/1515898‑1515970 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccAGCAATAACGTCCAGGCATAGGCTTTAACAATGTAGCTCGCCCACATCGGCAACAT  <  AP009048/1515984‑1515929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.