| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2227063 | 80 (0.980) | 8 (0.110) | 4/88 | NT | 10.6% | coding (1545/1716 nt) | dld | D‑lactate dehydrogenase, FAD‑binding, NADH independent |
| ? | AP009048 | = 2227072 | 63 (0.860) | coding (1554/1716 nt) | dld | D‑lactate dehydrogenase, FAD‑binding, NADH independent | |||||
TGTGCTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2226990‑2227063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCACTATGTAATCCTGATG < AP009048/2227072‑2227004 TGTGCTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATG < 1:3964172/71‑1 TGCTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGC < 1:7726488/70‑1 TGCTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGC < 1:5576667/70‑1 CTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTG > 1:732502/1‑70 TTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGC < 1:1815485/61‑1 TTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGC < 1:5955156/61‑1 TTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGAT < 1:4691371/59‑1 AGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGTAGCAGTTCCAGCAT < 1:6098301/71‑1 AGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATG > 1:5631161/1‑53 TTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTG < 1:5929865/52‑1 TTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATG < 1:821926/49‑1 GGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGTAGCAGTTCCAGCAT > 1:4119259/1‑51 GGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGTAGCAGTTCCAGCAT > 1:7057017/1‑51 GGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGTAGCAGTTCCAGCAT > 1:1832822/1‑51 CGTGGATGTGCATGCGTTAAAAGAACAGATGCTGTAGCAGTTCCAG > 1:2472055/1‑46 CGTGGATGTGCATGCGTTAAAAGAACAGATGCTGTAGCAGTTCCAG > 1:1186112/1‑46 CGTGGATGTGCATGCGTTAAAAGAACAGATGCTGTAGC > 1:5901260/1‑38 GTGGATGTGCATGCGTTAAAAGAACAGATGCTGTAGCAGTTCCAGCATC > 1:4009765/1‑49 GTGGATGTGCATGCGTTAAAAGAACAGATGCTGTAGCAGTTCCAGCATC > 1:2467335/1‑49 TGCTGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCACTAT > 1:4832428/1‑62 TGCTGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCACTAT > 1:2143181/1‑62 GCTGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCACTATGTAATCCTGA > 1:6774470/1‑71 GCTGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCACTATGTAATCCTGA > 1:6872561/1‑71 CTGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCACTATGTAATCCTGAT < 1:5955896/71‑1 CTGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCACTATGTAATCCTG < 1:1253049/69‑1 CTGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTT < 1:145861/54‑1 CTGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGC < 1:441402/47‑1 CTGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGC < 1:2360974/47‑1 TGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCACTATGTAATCCTGATG > 1:7826260/1‑71 TGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCAC > 1:7059177/1‑56 TGTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCAC > 1:1219533/1‑56 GTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACTCCTTTTTTCACTATGTAATCCTGATG > 1:3898958/1‑70 TGTGCTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2226990‑2227063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgTAGCAGTTCCAGCATCTGTTCTTTTAACGCATGCACATCCACGCCTTTTTTCACTATGTAATCCTGATG < AP009048/2227072‑2227004 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |