| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2227063 | 80 (0.980) | 8 (0.110) | 4/88 | NT | 10.6% | coding (1545/1716 nt) | dld | D‑lactate dehydrogenase, FAD‑binding, NADH independent |
| ? | AP009048 | = 2227072 | 63 (0.860) | coding (1554/1716 nt) | dld | D‑lactate dehydrogenase, FAD‑binding, NADH independent | |||||
Only 100 of 148 total aligned reads displayed.
CTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCG > AP009048/2226994‑2227132 | cTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTG > 1:732502‑M1/1‑70 (MQ=255) tATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTgg < 1:6499402/70‑1 (MQ=255) tGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGa < 1:2431130/69‑1 (MQ=255) tGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAAc < 1:1018683/71‑1 (MQ=255) tGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAAc > 1:1121327/1‑71 (MQ=255) tGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCCTTAAAAGAACAGATGCTGGa < 1:4920061/69‑1 (MQ=255) tCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTa > 1:2920967/1‑71 (MQ=255) tCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTa > 1:3597390/1‑71 (MQ=255) ccATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCt < 1:7082861/69‑1 (MQ=255) cATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTa > 1:743455/1‑69 (MQ=255) cATCAGGATTACATAGTGAAAAAAGGAGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTAc > 1:3898958‑M2/1‑69 (MQ=255) aTCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTAcag < 1:5955896‑M2/71‑4 (MQ=255) tCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTAcagc > 1:6872561‑M2/1‑67 (MQ=255) cAGGATTACATAGTGAAAAAAGTCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGa > 1:6265801/1‑59 (MQ=255) cAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGa > 1:7667340/1‑59 (MQ=255) cAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGa > 1:3421216/1‑59 (MQ=255) aGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGtagcagttccagcat < 1:6098301‑M1/71‑16 (MQ=255) aGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTAcagcag > 1:4531038/1‑71 (MQ=255) gATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACagcagc > 1:7919569/1‑70 (MQ=255) gATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcg < 1:1876521/71‑1 (MQ=255) gATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcg < 1:2395575/71‑1 (MQ=255) ttACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcg > 1:5917631/1‑71 (MQ=255) ttACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcg < 1:1421527/71‑1 (MQ=255) ttACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcg < 1:2981858/71‑1 (MQ=255) ttACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTG < 1:5929865‑M1/52‑1 (MQ=255) aCATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcggc > 1:4212076/1‑71 (MQ=255) aCATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcgg < 1:1730282/70‑1 (MQ=255) cATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcggcg < 1:1891242/71‑1 (MQ=255) aTAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTAcagca > 1:4832428‑M2/1‑57 (MQ=255) aTAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTAcagca > 1:2143181‑M2/1‑57 (MQ=255) tAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcggcgcg < 1:6580991/71‑1 (MQ=255) tAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcggcgcg < 1:5888590/71‑1 (MQ=255) tAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcg > 1:7238663/1‑64 (MQ=255) aGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACagcagc > 1:6532554/1‑62 (MQ=255) gTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTAca > 1:1219533‑M2/1‑54 (MQ=255) gTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTAca > 1:7059177‑M2/1‑54 (MQ=255) gTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcggcgcg > 1:5417223/1‑69 (MQ=255) gAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAg > 1:2666187/1‑70 (MQ=255) aaaaaaGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTAcag < 1:145861‑M2/54‑4 (MQ=255) aaaaaaGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTa > 1:2691220/1‑71 (MQ=255) aaaaaaGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTa > 1:6452014/1‑71 (MQ=255) aaaaaaGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTa < 1:7769799/71‑1 (MQ=255) aaaaaaGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTa > 1:6975249/1‑71 (MQ=255) aaaaGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGc < 1:5071423/47‑1 (MQ=255) aaGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCt > 1:6275669/1‑71 (MQ=255) aGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcggcgc > 1:2317477/1‑60 (MQ=255) aGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgcggcgc > 1:6469767/1‑60 (MQ=255) aGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTg < 1:1958292/71‑1 (MQ=255) aGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTg < 1:5005841/71‑1 (MQ=255) aGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTg < 1:3349169/71‑1 (MQ=255) ggCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGtagcagttccagcat > 1:7057017‑M1/1‑36 (MQ=255) ggCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGtagcagttccagcat > 1:4119259‑M1/1‑36 (MQ=255) ggCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTg > 1:7127777/1‑70 (MQ=255) ggCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGc < 1:2479947/71‑1 (MQ=255) gCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTAcag < 1:441402‑M2/47‑4 (MQ=255) cGTGGATGTGCATGCGTTAAAAGAACAGATGCTGtagcagttccag > 1:2472055‑M1/1‑34 (MQ=255) cGTGGATGTGCATGCGTTAAAAGAACAGATGCTGtagcagttccag > 1:1186112‑M1/1‑34 (MQ=255) gTGGATGTGCATGCGTTAAAAGAACAGATGCTGtagcagttccagcatc > 1:4009765‑M1/1‑33 (MQ=255) gTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGgcgcgc < 1:2067151/58‑1 (MQ=255) gTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGcc > 1:1979571/1‑69 (MQ=255) tGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAg > 1:1439199/1‑71 (MQ=255) ggATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAg > 1:4491726/1‑70 (MQ=255) gATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGc > 1:5090278/1‑37 (MQ=255) aTGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAgcgc > 1:4970626/1‑47 (MQ=255) aTGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCAt < 1:6731585/71‑1 (MQ=255) tgtgCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCAt > 1:3787021/1‑70 (MQ=255) gtgCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATaa > 1:1031268/1‑71 (MQ=255) gtgCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATaa > 1:7547412/1‑71 (MQ=255) gtgCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATaa > 1:1855649/1‑71 (MQ=255) cATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACg < 1:7619850/70‑1 (MQ=255) cATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACg < 1:4782733/70‑1 (MQ=255) ttAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGgcgcgc < 1:5440104/43‑1 (MQ=255) gAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGta > 1:5807907/1‑71 (MQ=255) gAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGta > 1:7850812/1‑71 (MQ=255) gAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGta > 1:3315552/1‑71 (MQ=255) aCAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGtata < 1:1796407/71‑1 (MQ=255) aCAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGtat > 1:3692104/1‑70 (MQ=255) cAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATaa < 1:5294394/71‑1 (MQ=255) aGATGCTGGAACTGCTACAGCAGCGAGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGtata > 1:5166585/1‑69 (MQ=255) gATGCTGGAACTGCTAcagcatctgttcttttaacgcatgcacatccac > 1:2467335‑M2/1‑16 (MQ=255) gATGCTGGAACTGCTAcagcatctgttcttttaacgcatgcacatccac > 1:4009765‑M2/1‑16 (MQ=255) aTGCTGGAACTGCTAcagcatctgttcttttaacgcatgcacatccacgccttttttcactatgtaatcct < 1:6098301‑M2/71‑57 (MQ=255) aTGCTGGAACTGCTAcagcatctgttcttttaacgcatgcacatccacgcc > 1:4119259‑M2/1‑15 (MQ=255) aTGCTGGAACTGCTAcagcatctgttcttttaacgcatgcacatccacgcc > 1:1832822‑M2/1‑15 (MQ=255) aTGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCa < 1:2452423/47‑1 (MQ=255) tGCTGtagcagttccagcatctgttcttttaacgcatgcacatccacgccttttttcactat > 1:2143181‑M1/1‑5 (MQ=255) gCTGtagcagttccagcatctgttcttttaacgcatgcacatccacgccttttttcactatgtaatcctga > 1:6774470‑M1/1‑4 (MQ=255) gCTGtagcagttccagcatctgttcttttaacgcatgcacatccacgccttttttcactatgtaatcctga > 1:6872561‑M1/1‑4 (MQ=255) gCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCAc > 1:2001597/1‑71 (MQ=255) cTGtagcagttccagcatctgttcttttaacgcatgcacatccacgccttttttcactatgtaatcctgat < 1:5955896‑M1/71‑69 (MQ=255) cTGtagcagttccagcatctgttcttttaacgcatgcacatccacgccttttttcactatgtaatcctg < 1:1253049‑M1/69‑67 (MQ=255) cTGtagcagttccagcatctgttcttttaacgcatgcacatccacgcctttttt < 1:145861‑M1/54‑52 (MQ=255) cTGtagcagttccagcatctgttcttttaacgcatgcacatccacgc < 1:2360974‑M1/47‑45 (MQ=255) cTGtagcagttccagcatctgttcttttaacgcatgcacatccacgc < 1:441402‑M1/47‑45 (MQ=255) cTGGAACTGCTAcagcatctgttcttttaacgcatgcacatccacg > 1:1186112‑M2/1‑12 (MQ=255) cTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATaaa > 1:2482692/1‑66 (MQ=255) cTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTAGTATAAAGCAc < 1:4372706/70‑1 (MQ=255) tGtagcagttccagcatctgttcttttaacgcatgcacatccacgccttttttcactatgtaatcctgatg > 1:7826260‑M1/1‑2 (MQ=255) tGtagcagttccagcatctgttcttttaacgcatgcacatccacgccttttttcac > 1:7059177‑M1/1‑2 (MQ=255) gtagcagttccagcatctgttcttttaacgcatgcacatccactccttttttcactatgtaatcctgatg > 1:3898958‑M1/1‑1 (MQ=255) | CTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCG > AP009048/2226994‑2227132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |