| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2483112 | 55 (0.680) | 7 (0.100) | 3/88 | NT | 11.2% | intergenic (‑37/‑181) | dsdC/dsdX | DNA‑binding transcriptional dual regulator/predicted transporter |
| ? | AP009048 | = 2483124 | 62 (0.850) | intergenic (‑49/‑169) | dsdC/dsdX | DNA‑binding transcriptional dual regulator/predicted transporter | |||||
TTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAATAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2483038‑2483112‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atagcTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGATTATGGAACCCCTTCGTGAAATA < AP009048/2483124‑2483055 TTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAA < 1:3806639/71‑1 AAGCAGCCGATTTCTTATTTCCAGAAGGGGTTCCATAATCACCTCATTTTTCTCTTAAGTGTAAAAAAA > 1:6085878/1‑69 AAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAA > 1:5239715/1‑69 AAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAA > 1:5176994/1‑69 GCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAATAGC > 1:4447665/1‑71 GATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAATAG > 1:5424241/1‑64 TCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAAT < 1:3819477/58‑1 TCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAA < 1:3137917/57‑1 GGGGTTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAAT < 1:4944227/44‑1 TTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAATA > 1:7917988/1‑41 TTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAATA > 1:451871/1‑41 CCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAATAGCTGAAATTTTGCCGCTAT < 1:6103805/58‑1 CCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAATAGCTGAAATTTTGCCGCTAT < 1:3808258/58‑1 ATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAATAGCTGAAATTTTGCCGCTATTT > 1:4109564/1‑58 TTTTCGCTTAAGTGTAAAAAAATAGCTGAAATTTTGCCG > 1:4440603/1‑39 TTTTCGCTTAAGTGTAAAAAAATAGCTGAAATTTTGCCG > 1:551677/1‑39 TTTTCGCTTAAGTGTAAAAAAATAGCTGAAATTTTGCCG > 1:5170368/1‑39 TTTTCGCTTAAGTGTAAAAAAATAGCTGAAATTTTGC > 1:7001873/1‑37 ATAGCTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGATTATGGAACCCCTTCG < 1:1516507/68‑1 ATAGCTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGATTATGGAACCCCTTC < 1:5051189/67‑1 ATAGCTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGATTATG < 1:6258856/57‑1 ATAGCTGAAATTTTGCCGCTATTTTTTTACACTTAAGCG > 1:3702939/1‑39 TAGCTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGATTATGGAACCCCTTCGTGA > 1:991560/1‑70 TAGCTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGATTATGGAACCCCTTC < 1:3386264/66‑1 GCTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGATTATGGAACCCCTTCGTGAAA < 1:1070127/70‑1 GCTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGATTATGGAACCCCTTCGTGAAA < 1:3433578/70‑1 CTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGATTATGGAACCCCTTCGTGAAATA < 1:7561460/71‑1 CTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGAT < 1:5715649/49‑1 TTAAGCAGCCGATTTCTTATTTCACGAAGGGGTTCCATAATCACCTCATTTTTCGCTTAAGTGTAAAAAAATAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2483038‑2483112‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atagcTGAAATTTTGCCGCTATTTTTTTACACTTAAGCGAAAAATGAGGTGATTATGGAACCCCTTCGTGAAATA < AP009048/2483124‑2483055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |