| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2593624 = | 56 (0.690) | 9 (0.130) | 6/86 | NT | 11.5% | coding (892/2016 nt) | ypfI | predicted hydrolase |
| ? | AP009048 | 2593665 = | 90 (1.260) | coding (851/2016 nt) | ypfI | predicted hydrolase | |||||
ATCAACTGGTATCGCGTTTTCCTCGAACGTTGTTAACCACTACGGTGCAGGGCTACGAAGGCACCGGACGTGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2593698‑2593624‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggttAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTCATC > AP009048/2593665‑2593732 ATCAACTGGTATCGCGTTTTCCTCGAACGTTGTTAACCACTACGGTGCAGGGCTACGAAGGCACCGGACG > 1:3107991/1‑70 ACTGGTATCGCGTTTTCCTCGAACGTTGTTAACCACTACGGTGCAGGGCTACGAAGGCACCGGACGTGGTT < 1:3169313/71‑1 ACGTTGTTAACCACTACGGTGCAGGGCTACGAAGGCACCGGACGTGGTT < 1:5133730/49‑1 ACCACTACGGTGCAGGGCTACGAAGGCACCGGACGTGGTTAACAACGTTCGAGGAAAACGCGA < 1:1635704/63‑1 CACTACGGTGCAGGGCTACGAAGGCACCGTA‑GTGGTTAACAACGTTCGAGGAAAACGC < 1:7492400/58‑1 CTACGGTGCAGGGCTACGAAGGCACCGGACGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATG > 1:986080/1‑71 CTACGGTGCAGGGCTACGAAGGCACCGGACGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATG > 1:6566416/1‑71 TACGGTGCAGGGCTACGAAGGCACCGGACGTGGTTAACAACGTTCGAGGAAAACGCGATACC < 1:2726863/62‑1 CGGTGCAGGGCTACGAAGGCACCGTA‑GTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAA > 1:5992691/1‑70 CGGTGCAGGGCTACGAAGGCACCGTA‑GTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAA > 1:1032369/1‑70 GGGCTACGAAGGCACCGTA‑GTGGTTAACAACGTTCGAG > 1:1689588/1‑38 GGGCTACGAAGGCACCGTA‑GTGGTTAACAACGTTCGAG > 1:2581769/1‑38 GTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTC < 1:6852384/71‑1 GTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTC < 1:4465678/71‑1 GTGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTT > 1:3499958/1‑70 TGGTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTCA < 1:1175013/71‑1 GTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTCATC < 1:4867673/71‑1 GTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTCATC < 1:4771814/71‑1 GTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTCATC < 1:1288076/71‑1 GTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTCATC < 1:1278961/71‑1 GTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTCAT < 1:2112820/70‑1 GTTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTCAT > 1:7099732/1‑70 GTTAACAACGTTCGAGG‑AAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGG < 1:2216794/63‑1 TTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGG < 1:55380/52‑1 TTAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGG < 1:6608915/52‑1 ATCAACTGGTATCGCGTTTTCCTCGAACGTTGTTAACCACTACGGTGCAGGGCTACGAAGGCACCGGACGTGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2593698‑2593624‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggttAACAACGTTCGAGGAAAACGCGATACCAGTTGATGCAACAATGGCGCAGGTATGGCTGCGGCTTCATC > AP009048/2593665‑2593732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |