| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2593624 = | 56 (0.690) | 9 (0.130) | 6/86 | NT | 11.5% | coding (892/2016 nt) | ypfI | predicted hydrolase |
| ? | AP009048 | 2593665 = | 90 (1.260) | coding (851/2016 nt) | ypfI | predicted hydrolase | |||||
Only 100 of 108 total aligned reads displayed.
GCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGT > AP009048/2593554‑2593694 | gcCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCaaaaa < 1:4585594/71‑1 (MQ=255) cccAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCaaaaaa < 1:4414466/71‑1 (MQ=255) gatgaagccgcagccatacctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttAAc < 1:1278961‑M1/3‑1 (MQ=255) gatgaagccgcagccatacctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttAAc < 1:1288076‑M1/3‑1 (MQ=255) gatgaagccgcagccatacctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttAAc < 1:4771814‑M1/3‑1 (MQ=255) gatgaagccgcagccatacctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttAAc < 1:4867673‑M1/3‑1 (MQ=255) ccAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAAc < 1:110619/71‑1 (MQ=255) ccAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAAc < 1:7032080/71‑1 (MQ=255) cAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAAcc < 1:2256806/71‑1 (MQ=255) atgaagccgcagccatacctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttAAc > 1:7099732‑M1/68‑70 (MQ=255) atgaagccgcagccatacctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttAAc < 1:2112820‑M1/3‑1 (MQ=255) tgaagccgcagccatacctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttAACCa < 1:1175013‑M1/5‑1 (MQ=255) aGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCaaaaa > 1:7707170/1‑67 (MQ=255) gaagccgcagccatacctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttAACCAc < 1:6852384‑M1/6‑1 (MQ=255) gaagccgcagccatacctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttAACCAc < 1:4465678‑M1/6‑1 (MQ=255) gCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCAc > 1:2906971/1‑71 (MQ=255) gCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCAc > 1:2160745/1‑71 (MQ=255) cGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACg > 1:642570/1‑71 (MQ=255) aagccgcagccatacctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttAACCAc > 1:3499958‑M1/65‑70 (MQ=255) aTCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTcc > 1:1286012/1‑71 (MQ=255) ccgcagccatacctgcgccattgttgcatcaactggtatcgcgtttcctcgaacgttgttAAc < 1:2216794‑M1/3‑1 (MQ=255) ttGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCtt > 1:271399/1‑71 (MQ=255) ttGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCtt > 1:5767022/1‑71 (MQ=255) tGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCaaaaaa > 1:326341/1‑54 (MQ=255) cctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttaa < 1:6608915‑M1/2‑1 (MQ=255) cctgcgccattgttgcatcaactggtatcgcgttttcctcgaacgttgttaa < 1:55380‑M1/2‑1 (MQ=255) gTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAg > 1:3661097/1‑71 (MQ=255) gTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAg > 1:5713452/1‑71 (MQ=255) ttCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTc < 1:3545682/56‑1 (MQ=255) cAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCg > 1:4529427/1‑56 (MQ=255) cAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGccc > 1:7724882/1‑71 (MQ=255) cAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGccc > 1:2515800/1‑71 (MQ=255) aaaaCGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCt > 1:2210950/1‑71 (MQ=255) aaaaCGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCt > 1:7708503/1‑71 (MQ=255) aaaCGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTg > 1:7405582/1‑71 (MQ=255) aaaCGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTg > 1:3915777/1‑71 (MQ=255) ttgcatcaactggtatcgcgttttcctcgaacgttgttAACCAC‑TACGGTGCCTTCGTAGCCCTGCACCg > 1:1032369‑M1/39‑70 (MQ=255) ttgcatcaactggtatcgcgttttcctcgaacgttgttAACCAC‑TACGGTGCCTTCGTAGCCCTGCACCg > 1:5992691‑M1/39‑70 (MQ=255) tAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCg < 1:2704468/68‑1 (MQ=255) catcaactggtatcgcgttttcctcgaacgttgttAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAg > 1:6566416‑M1/36‑71 (MQ=255) aaTGCGGAAAGCGAGCGCAAAATTTCAGCaaaaaa < 1:139001/35‑1 (MQ=255) aaTGCGGAAAGCGAGCGCAAAATTTCAGCaaaaaa < 1:4775372/35‑1 (MQ=255) aaTGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCgg > 1:2822655/1‑45 (MQ=255) aaTGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCgg > 1:2176990/1‑45 (MQ=255) aaTGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTg < 1:6846634/61‑1 (MQ=255) aaTGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTg > 1:3562774/1‑71 (MQ=255) aTGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTgg < 1:3882139/71‑1 (MQ=255) cGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCgg > 1:2666414/1‑41 (MQ=255) cGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGtt > 1:700820/1‑70 (MQ=255) cGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGtt > 1:7703081/1‑70 (MQ=255) ggtatcgcgttttcctcgaacgttgttAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTa < 1:2726863‑M1/35‑1 (MQ=255) aaaGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGt < 1:1459192/47‑1 (MQ=255) aaaGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTaac > 1:3472200/1‑70 (MQ=255) aaGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGt > 1:3838544/1‑65 (MQ=255) aaGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTaacaa > 1:1719619/1‑71 (MQ=255) agcgagcgCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTaacaac > 1:4996356/1‑71 (MQ=255) tcgcgttttcctcgaacgttgttAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGt < 1:1635704‑M1/40‑1 (MQ=255) cgagcgCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGt > 1:2375862/1‑71 (MQ=255) gcgttttcctcgaacgttgttAACCAC‑TACGGTGCCTTCGTAGCCCTGCACCGTAGTg < 1:7492400‑M1/37‑1 (MQ=255) gagcgCAAAATTTCAGCAAAAACCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACg < 1:3565899/69‑1 (MQ=255) agcgCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCa > 1:3253539/1‑50 (MQ=255) agcgCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTc > 1:7916458/1‑71 (MQ=255) gcgcAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTc < 1:41803/70‑1 (MQ=255) cgcAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTa < 1:7097193/40‑1 (MQ=255) cgcAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTc > 1:2895210/1‑69 (MQ=255) gcAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGtt > 1:5450295/1‑67 (MQ=255) gcAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAg < 1:1235543/71‑1 (MQ=255) cAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAg > 1:6714612/1‑70 (MQ=255) ctcgaacgttgttAACCAC‑TACGGTGCCTTCGTAGccc > 1:2581769‑M1/14‑38 (MQ=255) ctcgaacgttgttAACCAC‑TACGGTGCCTTCGTAGccc > 1:1689588‑M1/14‑38 (MQ=255) aaTTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTa > 1:1898447/1‑48 (MQ=255) aaTTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACg < 1:5023345/61‑1 (MQ=255) aaTTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGa > 1:5403912/1‑69 (MQ=255) tCAGCAAAAAACCACGTCCGGTTCCTTCGTAGCCCTGCACCGTAGTGGTTaac > 1:4296704/1‑53 (MQ=255) tCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAAcgc > 1:2571069/1‑71 (MQ=255) cAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAAcgc > 1:5697230/1‑70 (MQ=255) cAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAAcgc < 1:3192342/70‑1 (MQ=255) cAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAAcgc > 1:7717903/1‑70 (MQ=255) accAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTaacaac < 1:5617746/52‑1 (MQ=255) aGCAAAAACCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTaacaac < 1:5424519/54‑1 (MQ=255) aGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGtt < 1:6856732/48‑1 (MQ=255) aGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGa > 1:7254631/1‑71 (MQ=255) cAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCTAGGaaa > 1:4092693/1‑63 (MQ=255) cAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGaaa > 1:5858017/1‑63 (MQ=255) cAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGaaa > 1:7539942/1‑63 (MQ=255) aaaacCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGaaaa < 1:884953/62‑1 (MQ=255) aaaacCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGaa < 1:932620/60‑1 (MQ=255) aaaacCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAAcgc < 1:5981711/65‑1 (MQ=255) aaaaaCCACGTCCGGTGCCTTCGTAGCCCTGCACCGt < 1:3905060/37‑1 (MQ=255) aaaaaCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGt < 1:353289/43‑1 (MQ=255) aaaaaCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTaacaac < 1:3014889/50‑1 (MQ=255) aaaaaCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTc < 1:1036132/54‑1 (MQ=255) aaaaaCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAAcgc < 1:7085138/65‑1 (MQ=255) aaaaaCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGa < 1:2279267/67‑1 (MQ=255) aaaaCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATAc > 1:4873438/1‑69 (MQ=255) aaaaCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGT‑‑ACAACGTTCGAGGAAAAcgc < 1:812480/62‑1 (MQ=255) aaaCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAg > 1:4383631/1‑71 (MQ=255) aaaCCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAg < 1:3705574/71‑1 (MQ=255) AACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGt < 1:5133730‑M1/49‑1 (MQ=255) AACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGt < 1:3169313‑M1/71‑1 (MQ=255) | GCCCAGCGGATCGGCTGTTGCAGTTCAAAACGGTGTAAATGCGGAAAGCGAGCGCAAAATTTCAGCAAAAAACCACGTCCGGTGCCTTCGTAGCCCTGCACCGTAGTGGTTAACAACGTTCGAGGAAAACGCGATACCAGT > AP009048/2593554‑2593694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |