| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3224498 | 95 (1.170) | 6 (0.080) | 3/88 | NT | 7.3% | coding (121/450 nt) | ebgC | cryptic beta‑D‑galactosidase, beta subunit |
| ? | AP009048 | = 3224522 | 67 (0.920) | coding (145/450 nt) | ebgC | cryptic beta‑D‑galactosidase, beta subunit | |||||
CTGGCAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3224424‑3224498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccaCGCGGTAAGTCAATGAGTCACCGATGGAGTGGGCGACGCCAGGCTGAATGTTGTCGATATTTTCAATC < AP009048/3224522‑3224455 CTGGCAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCAC > 1:4378341/1‑71CTGGCAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCAC > 1:4216033/1‑71 TGGCAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACT > 1:1026066/1‑71 TGGCAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCAC > 1:5052097/1‑70 TGGCAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCAC > 1:6556538/1‑70 GCAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCAC < 1:7083065/68‑1 CAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCA > 1:627664/1‑71 CAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCA < 1:5017884/71‑1 CTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCA > 1:5139197/1‑56 GAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACT > 1:2913334/1‑46 GCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCA < 1:6543616/46‑1 GCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCA < 1:3212823/46‑1 TTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCC < 1:6671647/41‑1 TTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCC < 1:7080340/41‑1 TTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCC < 1:2557221/41‑1 TTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCC < 1:7341752/41‑1 ACATTCAGCCTGGCGTCGCCCACTCCACGCGGTAAGTCAATGAGTCACCGA < 1:3861245/51‑1 ATTCAGCCTGGCGTCTCCCAGTCCACGCGGTAAGTCAATGAGTCACC < 1:3667507/47‑1 ATTCAGCCTGGCGTCTCCCACTCCACGCGGTAAGTCAATGAGTCACC < 1:977897/47‑1 ATTCAGCCTGGCGTCTCCCACTCCACGCGGTAAGTCAATGAGTCACC < 1:2319854/47‑1 ATTCAGCCTGGCGTCGCCCACTCCACGCGGTAAGTCAATGAGTCACCGATG > 1:3994773/1‑51 ATTCAGCCTGGCGTCGCCCACTCCACGCGGTAAGTCAATGAGTCACCGATG > 1:3081319/1‑51 CACGCGGTAAGTCAATGAGTCACCGATGGAGTGGGCGACGCCAGGCTGAATGTTGTCGATATTTTCAATC < 1:2148699/70‑1 CACGCGGTAAGTCAATGAGTCACCGATGGAGTGGGCGACGCCAGGCTGAATGTTGTCGATATTTTCAA < 1:2749224/68‑1 ACGCGGTAAGTCAATGAGTCACCGATGGAGTGGGCGACGC < 1:2898144/40‑1 CTGGCAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3224424‑3224498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccaCGCGGTAAGTCAATGAGTCACCGATGGAGTGGGCGACGCCAGGCTGAATGTTGTCGATATTTTCAATC < AP009048/3224522‑3224455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |