| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3224498 | 95 (1.170) | 6 (0.080) | 3/88 | NT | 7.3% | coding (121/450 nt) | ebgC | cryptic beta‑D‑galactosidase, beta subunit |
| ? | AP009048 | = 3224522 | 67 (0.920) | coding (145/450 nt) | ebgC | cryptic beta‑D‑galactosidase, beta subunit | |||||
AGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCATTACT > AP009048/3224452‑3224588 | aGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACcgcg < 1:4111122/71‑1 (MQ=255)aGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACcgcg < 1:1696968/71‑1 (MQ=255) gATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGtg < 1:2148699‑M2/70‑3 (MQ=255) ttGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACcgcg < 1:7414182/66‑1 (MQ=255) ttGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGtg < 1:2749224‑M2/68‑3 (MQ=255) tGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGgaga > 1:315442/1‑71 (MQ=255) gAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGgaga > 1:3240672/1‑70 (MQ=255) gAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGgaga < 1:17179/70‑1 (MQ=255) gAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGgaga > 1:6345482/1‑70 (MQ=255) aaaaTATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGagaca < 1:2974272/71‑1 (MQ=255) aaaaTATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGagaca < 1:1156304/71‑1 (MQ=255) aaaaTATCGACAACATTCAGACTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGgaga > 1:4160521/1‑69 (MQ=255) aaTATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGagacaga > 1:1705789/1‑71 (MQ=255) aaTATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGagacaga < 1:4737668/71‑1 (MQ=255) aaTATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGagacag > 1:1307513/1‑70 (MQ=255) atatCGACAACATGCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGagacaga > 1:7732591/1‑70 (MQ=255) tatCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACt < 1:2926175/71‑1 (MQ=255) tatCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACt < 1:363832/71‑1 (MQ=255) tatCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACt < 1:7234021/71‑1 (MQ=255) tCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTc < 1:2760507/70‑1 (MQ=255) tCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTc < 1:5119298/70‑1 (MQ=255) gACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCcgc < 1:4272909/71‑1 (MQ=255) acaacaTTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCcgc > 1:5210258/1‑70 (MQ=255) acaTTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGAcc > 1:917553/1‑71 (MQ=255) caTTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCg < 1:4255848/71‑1 (MQ=255) aTTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGa < 1:3169095/71‑1 (MQ=255) aGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATgcg > 1:6411317/1‑71 (MQ=255) aGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATg > 1:2780929/1‑69 (MQ=255) ccTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATgcgc > 1:3559586/1‑70 (MQ=255) ccTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATgcccg > 1:370110/1‑68 (MQ=255) ccTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATgcccg > 1:328226/1‑68 (MQ=255) ccTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCt < 1:3134340/71‑1 (MQ=255) cTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCt < 1:3358304/70‑1 (MQ=255) ggCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTAtt > 1:2104749/1‑71 (MQ=255) gCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGt < 1:2898144‑M2/40‑2 (MQ=255) gCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCt < 1:7216398/67‑1 (MQ=255) gCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTAttt < 1:6854526/71‑1 (MQ=255) gCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTAtt > 1:4932598/1‑70 (MQ=255) gTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTAc < 1:2192149/71‑1 (MQ=255) tCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTAc < 1:3479812/70‑1 (MQ=255) gCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCg < 1:7471459/70‑1 (MQ=255) cccACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGAc < 1:4614135/52‑1 (MQ=255) ccACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGc < 1:7904686/71‑1 (MQ=255) cACTCCATCGGTGACTCATTGACTTACCGCGTGGagac < 1:1436181/38‑1 (MQ=255) cACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTAcc < 1:2082127/66‑1 (MQ=255) cACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCa < 1:7806343/71‑1 (MQ=255) aCTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGAc > 1:2340838/1‑49 (MQ=255) cTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGAcc > 1:7563901/1‑49 (MQ=255) cTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTa > 1:2126776/1‑58 (MQ=255) cTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATc < 1:6322470/71‑1 (MQ=255) tCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGAc < 1:999983/47‑1 (MQ=255) tCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCaac > 1:2463545/1‑68 (MQ=255) ccATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTAcc > 1:7526615/1‑62 (MQ=255) ccATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTAcc > 1:5887207/1‑62 (MQ=255) ccATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGa > 1:2583540/1‑71 (MQ=255) cATCGGTGACTCATTGACTTACCGCGtggagtgggcgacgccaggctgaat > 1:3994773‑M2/1‑26 (MQ=255) cATCGGTGACTCATTGACTTACCGCGtggagtgggcgacgccaggctgaat > 1:3081319‑M2/1‑26 (MQ=255) cATCGGTGACTCATTGACTTACCGCGTGGagacaga > 1:2142434/1‑36 (MQ=255) aTCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACg > 1:4382794/1‑71 (MQ=255) tCGGTGACTCATTGACTTACCGCGtggagtgggcgacgccaggctgaatgt < 1:3861245‑M2/51‑28 (MQ=255) cGGTGACTCATTGACTTACCGCGTGGAGACAGACTCcg > 1:3499462/1‑38 (MQ=255) cGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTAt > 1:1246367/1‑53 (MQ=255) cGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCgg > 1:1511169/1‑60 (MQ=255) ggTGACTCATTGACTTACCGCGtggagtgggagacgccaggctgaat < 1:2319854‑M2/47‑26 (MQ=255) ggTGACTCATTGACTTACCGCGtggagtgggagacgccaggctgaat < 1:977897‑M2/47‑26 (MQ=255) ggTGACTCATTGACTTACCGCGtggactgggagacgccaggctgaat < 1:3667507‑M2/47‑26 (MQ=255) gACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGa < 1:7690724/41‑1 (MQ=255) gACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGa < 1:196869/41‑1 (MQ=255) gACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGa < 1:5218843/41‑1 (MQ=255) gACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGa < 1:3367396/41‑1 (MQ=255) gACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGa < 1:4802603/41‑1 (MQ=255) aCTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTAtttt > 1:7659913/1‑71 (MQ=255) gtCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATc < 1:4877833/58‑1 (MQ=255) gtCAATGAGTCACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATc > 1:5310002/2‑59 (MQ=255) gtCAATGAGTCACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATc > 1:971024/2‑59 (MQ=255) cTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCt < 1:6519115/45‑1 (MQ=255) cTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTg < 1:780803/71‑1 (MQ=255) cTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTg < 1:5567062/71‑1 (MQ=255) cATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGa < 1:1006856/59‑1 (MQ=255) aTTGACTTACCGCGTGGAGACAGACTCCGCGACCTATGCGCTATTTACCGGGCATCGACGCTATTTTTAAg > 1:847934/1‑71 (MQ=255) aTTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTAt < 1:4625526/44‑1 (MQ=255) aTTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTAt < 1:1671871/44‑1 (MQ=255) aTTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGa < 1:2768945/69‑1 (MQ=255) aTTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAg > 1:4636625/1‑71 (MQ=255) aTTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAg > 1:1438961/1‑71 (MQ=255) aCTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTg < 1:5611395/64‑1 (MQ=255) aCTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTg < 1:4684371/64‑1 (MQ=255) aCTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGc < 1:5844505/70‑1 (MQ=255) cTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCAt > 1:1336776/1‑71 (MQ=255) ttACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCAt > 1:7356475/1‑70 (MQ=255) aCCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCAt < 1:1145062/68‑1 (MQ=255) aCCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCAt < 1:243683/68‑1 (MQ=255) ccGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCATtact < 1:1917725/71‑1 (MQ=255) cgcgTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTg < 1:3219133/58‑1 (MQ=255) cgTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAg > 1:650575/1‑59 (MQ=255) cgTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGc < 1:5768339/62‑1 (MQ=255) cgTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCa > 1:5667262/1‑63 (MQ=255) | AGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCATTACT > AP009048/3224452‑3224588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |