| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3563016 = | 50 (0.610) | 5 (0.070) | 4/84 | NT | 7.9% | intergenic (‑74/‑94) | yihV/yihU | predicted sugar kinase/predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain |
| ? | AP009048 | 3563049 = | 74 (1.060) | intergenic (‑107/‑61) | yihV/yihU | predicted sugar kinase/predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain | |||||
TTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3563090‑3563016‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGGCAG > AP009048/3563049‑3563116 TTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCA < 1:1070549/71‑1 ATGTCACCTTTTGTCATTTATGACATGCTTTGCTTGTCTG‑TTTTGATCGTATTTGTAATTTATCGTCAAA > 1:7581263/1‑70 ACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAA > 1:7712791/1‑66 TTTATGACATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAAA < 1:1102401/56‑1 TTATGACATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAAA < 1:1393293/55‑1 TATGACATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAA < 1:2525708/53‑1 TATGACATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAA < 1:5123154/53‑1 ATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCA > 1:2142584/1‑45 TGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAA < 1:2084410/46‑1 TGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAA < 1:3454073/46‑1 GCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAAAA > 1:2026933/1‑47 GCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAAAA > 1:3859587/1‑47 TTTTTGATCGTATTTGTAATTTATCGTCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGA > 1:2120956/1‑70 TTTGATCGTATTTGTAATTTATCGTCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACA > 1:7382945/1‑70 TTGATCGTATTTGTAATTTATCGTCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACAT > 1:1208463/1‑70 GATCGTATTTGTAATTTATCGTCAAAAACAGACAAGCAAAGCA < 1:7299464/43‑1 GATCGTATTTGTAATTTATCGTCAAAAACAGACAAGCAAAGCA < 1:765205/43‑1 CAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGG > 1:4254207/1‑71 AAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGG > 1:6493475/1‑70 AAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGG < 1:1342896/70‑1 AAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGG > 1:2072408/1‑70 AAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAG < 1:405933/61‑1 AAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAG < 1:4203080/61‑1 AAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAA > 1:6387729/1‑46 AACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGGCAG > 1:4955494/1‑70 AACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGGCAG > 1:2777364/1‑70 AACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGGCAG > 1:2592380/1‑70 AACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGGCAG > 1:7497740/1‑70 TTATGTCACTTTTTGTCATTTATGACATGCTTTGCTTGTCTGTTTTTGATCGTATTTGTAATTTATCGTCAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3563090‑3563016‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGGCAG > AP009048/3563049‑3563116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |