| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3847980 | 72 (0.880) | 5 (0.070) | 3/86 | NT | 7.0% | coding (117/1197 nt) | kbl | glycine C‑acetyltransferase |
| ? | AP009048 | = 3847986 | 70 (0.980) | coding (123/1197 nt) | kbl | glycine C‑acetyltransferase | |||||
AACCGCACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3847905‑3847980‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggctTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACCCTTCC < AP009048/3847986‑3847917 AACCGCACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTG > 1:1655551/1‑71AACCGCACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTG > 1:2236864/1‑71 ACCGCACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGT < 1:361452/71‑1 ACCGCACGG‑‑GGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGG > 1:2731906/1‑71 CGCACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGG < 1:3668234/71‑1 GCACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGC > 1:2063554/1‑71 CACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCT > 1:6775982/1‑71 CACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCT < 1:1508543/71‑1 CACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCT < 1:4348881/71‑1 CACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCT > 1:3876168/1‑71 GTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCT > 1:2614265/1‑58 AGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTTCCATCAGCCACAGTGA > 1:4234297/1‑66 AAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGG > 1:6712068/1‑45 AAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGG > 1:3941026/1‑45 AAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGG > 1:3585611/1‑45 AGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTTCCATCAGCCACA > 1:903053/1‑59 CGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGT > 1:5798075/1‑38 AAGCAGATATCACTGTGGCTTCCATCAGCCACAGT > 1:350118/1‑35 AAGCAGATATCACTGTGGCTTCCATCAGCCACAGT > 1:6886365/1‑35 AAGCAGATATCACTGTGGCTTCCATCAGCCACAGT > 1:2124971/1‑35 GTGGCTTCCATCAGCCACAGTGATATCTGCTTGCTGGGCAGACGTAATAATGCGCTCTTCTTTAAACAACC < 1:6272863/71‑1 GTGGCTTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACC > 1:7932018/1‑71 GTGGCTTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAAT < 1:4905775/48‑1 TGGCTTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACCC > 1:1408763/1‑71 TGGCTTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACA < 1:2954828/67‑1 GGCTTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACCCT > 1:3900709/1‑71 GGCTTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAA > 1:134306/1‑64 GGCTTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCT > 1:5111288/1‑56 GCTTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACCCTT > 1:5868166/1‑71 GCTTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACCCTT < 1:637969/71‑1 GCTTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACCCT < 1:3585102/70‑1 TTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACCCTTCC > 1:7097122/1‑71 TTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACCCTTCC > 1:7229413/1‑71 TTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACCCTTCC > 1:3408733/1‑71 TTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAA < 1:3671295/42‑1 AACCGCACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3847905‑3847980‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggctTCCATCAGCCACAGTGATATCTGCTTGCTGCGCAGACGTAATAATGCGCTCTTCTTTAAACAACCCTTCC < AP009048/3847986‑3847917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |