| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3847980 | 72 (0.880) | 5 (0.070) | 3/86 | NT | 7.0% | coding (117/1197 nt) | kbl | glycine C‑acetyltransferase |
| ? | AP009048 | = 3847986 | 70 (0.980) | coding (123/1197 nt) | kbl | glycine C‑acetyltransferase | |||||
Only 100 of 112 total aligned reads displayed.
GGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCCTGATCTGATTGCGGCGG > AP009048/3847917‑3848056 | ggAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAa > 1:7097122‑M2/1‑70 (MQ=255)ggAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAa > 1:3408733‑M2/1‑70 (MQ=255) aaGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAagc < 1:637969‑M2/71‑4 (MQ=255) aaGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAagc > 1:5868166‑M2/1‑68 (MQ=255) aGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAagcc > 1:3900709‑M2/1‑67 (MQ=255) gggTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAagcca > 1:1408763‑M2/1‑66 (MQ=255) ggTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAagccac > 1:7932018‑M2/1‑65 (MQ=255) gttgttTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACg > 1:3707320/1‑71 (MQ=255) ttgttTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGt > 1:6726386/1‑71 (MQ=255) ttgttTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGt > 1:6717839/1‑71 (MQ=255) tgttTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGt > 1:1742665/1‑70 (MQ=255) gttTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCa > 1:2955651/1‑71 (MQ=255) gttTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCa > 1:6589611/1‑71 (MQ=255) tttAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAagcc > 1:134306‑M2/1‑60 (MQ=255) tAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTc > 1:501983/1‑67 (MQ=255) tAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTc > 1:4643826/1‑67 (MQ=255) tAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCAATGTGGCTGATGGAAGCCACGTCAtt > 1:4767098/1‑70 (MQ=255) aaaGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCAtt < 1:6342219/69‑1 (MQ=255) aaaGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTa > 1:5542542/1‑70 (MQ=255) aaaGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTa < 1:3878625/70‑1 (MQ=255) aaaGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTa < 1:3188064/70‑1 (MQ=255) aagaagAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTaa < 1:4684933/70‑1 (MQ=255) aagaagAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTaa < 1:3509553/70‑1 (MQ=255) aagaagAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTaa < 1:1230260/70‑1 (MQ=255) gaagaGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACtt < 1:1449918/71‑1 (MQ=255) agagCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAagcc > 1:5111288‑M2/1‑52 (MQ=255) gagCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTtg > 1:6300233/1‑71 (MQ=255) cATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGcc > 1:7850291/1‑70 (MQ=255) cATTATTACGACTGAGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCca < 1:1681896/71‑1 (MQ=255) attattACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCcaa > 1:7578697/1‑71 (MQ=255) attattACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCcaa < 1:5479782/71‑1 (MQ=255) ttattaCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACttt < 1:7732826/62‑1 (MQ=255) ttattaCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCcaac < 1:1796117/71‑1 (MQ=255) attaCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAagccac < 1:4905775‑M2/48‑7 (MQ=255) attaCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCcaaca < 1:3640485/70‑1 (MQ=255) attaCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGACACGTCATTAACTTTTGTGCcaaca < 1:240865/70‑1 (MQ=255) ttaCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAa < 1:3671295‑M2/42‑2 (MQ=255) ttaCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGt > 1:2231551/1‑49 (MQ=255) ttaCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGt > 1:4163386/1‑49 (MQ=255) ttaCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCcaacaa < 1:2657303/70‑1 (MQ=255) aCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACt < 1:811522/70‑1 (MQ=255) aCGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACt < 1:929110/70‑1 (MQ=255) gTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTAtc < 1:7573822/71‑1 (MQ=255) cTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTtg > 1:2721274/1‑55 (MQ=255) cTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTAtct < 1:77448/70‑1 (MQ=255) cagcaAGCAGATATCACTGTGGCTGATTGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCt < 1:4353/71‑1 (MQ=255) cagcaAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCaacaac > 1:2794008/1‑60 (MQ=255) caagcaGATATCACTGTGGCTGATGGAAGCCACGTCATTaa > 1:6396584/1‑41 (MQ=255) caagcaGATATCACTGTGGCTGATGGAAGCCACGTCATTaa > 1:1325418/1‑41 (MQ=255) caagcaGATATCACTGTGGCTGATGGAAGCCACGTCATTaa > 1:7156120/1‑41 (MQ=255) caagcaGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGTTGGc > 1:4442443/1‑71 (MQ=255) caagcaGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGc < 1:2788781/71‑1 (MQ=255) aagcaGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGc > 1:7463189/1‑70 (MQ=255) aagcaGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCg < 1:3489270/71‑1 (MQ=255) agcaGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGa < 1:7927623/71‑1 (MQ=255) gcaGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTAt > 1:7136468/1‑57 (MQ=255) gATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAatca < 1:3033847/71‑1 (MQ=255) atatCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCcaaca < 1:4825962/48‑1 (MQ=255) atatCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCcaaca < 1:1317788/48‑1 (MQ=255) atatCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCcaaca < 1:4816493/48‑1 (MQ=255) tatCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAatcatc > 1:446036/1‑71 (MQ=255) atCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCaacaac > 1:4148035/1‑48 (MQ=255) atCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACt < 1:2185685/49‑1 (MQ=255) atCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACt < 1:876276/49‑1 (MQ=255) atCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACt < 1:1462380/49‑1 (MQ=255) atCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCg < 1:3849611/55‑1 (MQ=255) atCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCg < 1:3129475/55‑1 (MQ=255) tCACTGTGGCTGATGGAagccacagtgatatctgcttgctgcgcagacgtaataatgcgctcttct > 1:4234297‑M2/1‑17 (MQ=255) tCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCg < 1:1840126/54‑1 (MQ=255) tCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATcc > 1:3765364/1‑70 (MQ=255) tCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCct > 1:1426129/1‑71 (MQ=255) tCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCct > 1:6239267/1‑71 (MQ=255) aCTGTGGCTGATGGAagccacagtgatatctgctt > 1:6886365‑M2/1‑15 (MQ=255) aCTGTGGCTGATGGAagccacagtgatatctgctt > 1:2124971‑M2/1‑15 (MQ=255) aCTGTGGCTGATGGAagccacagtgatatctgctt > 1:350118‑M2/1‑15 (MQ=255) aCTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCcaa > 1:1839506/1‑41 (MQ=255) aCTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCctga > 1:7149883/1‑71 (MQ=255) aCTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCctga > 1:6901680/1‑71 (MQ=255) aCTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCctga > 1:4570661/1‑71 (MQ=255) cTGTGGCTGATGGAAGCCACGTCATTAACTTTAGTGCCAACAACTATCTCGGGCTGGCGAATCATCctgat < 1:274235/71‑1 (MQ=255) tgtgGCTGATGGAagccacagtgatatctgcttgctgcgcagacgtaataatgcgctct > 1:903053‑M2/1‑13 (MQ=255) tgtgGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAatcatc > 1:6834963/1‑65 (MQ=255) tgtgGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAatca < 1:650698/63‑1 (MQ=255) tgGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTAt < 1:778788/44‑1 (MQ=255) tgGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTAt < 1:1077678/44‑1 (MQ=255) tgGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTAt < 1:444842/44‑1 (MQ=255) tgGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTAt < 1:5684844/44‑1 (MQ=255) gCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCctgatctgat > 1:2755842/1‑71 (MQ=255) gCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCctgatctga < 1:6094010/70‑1 (MQ=255) cTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCCTGATCTGAtt < 1:7113385/71‑1 (MQ=255) gATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGa > 1:7677403/1‑52 (MQ=255) aTGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAatcatc > 1:3634758/1‑57 (MQ=255) aTGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAatcatc > 1:83498/1‑57 (MQ=255) aTGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAatcatc > 1:1900728/1‑57 (MQ=255) aTGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCCTGATCTGATTgc < 1:2991791/70‑1 (MQ=255) ggAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCTAATCATCctg < 1:7138592/58‑1 (MQ=255) gAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCCTGATCTGATTgcggcg > 1:5952288/1‑71 (MQ=255) gAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCCTGATCTGATTgcggcg > 1:4770978/1‑71 (MQ=255) gAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCCTGATCTGATTgcggc < 1:5088270/70‑1 (MQ=255) aaGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCCTGATCTGATTgcggctg > 1:7456093/1‑69 (MQ=255) | GGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCCTGATCTGATTGCGGCGG > AP009048/3847917‑3848056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |