| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 4015734 = | NA (NA) | 3 (0.040) | 3/86 | NT | 32.8% | coding (304/1137 nt) | yhhI | predicted transposase |
| ? | AP009048 | 4015766 = | 7 (0.090) | coding (272/1137 nt) | yhhI | predicted transposase | |||||
TCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGataaag‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/4015803‑4015734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGCAATGGTATCGTGAACAGGAAT > AP009048/4015766‑4015836 TCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGA < 1:4914957/71‑1TCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGA < 1:924438/71‑1 CTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATA < 1:303713/71‑1 CTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGAT > 1:6397916/1‑70 CTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGAT < 1:5381141/70‑1 TGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATA > 1:4740488/1‑70 TGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATA > 1:2719465/1‑70 GTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGA > 1:3963697/1‑67 TATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAG < 1:7201700/71‑1 TATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA < 1:1182711/70‑1 TATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAA < 1:5859110/69‑1 TATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATA > 1:2454972/1‑68 CCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATA > 1:3533151/1‑61 CTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA < 1:5777478/62‑1 TGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA < 1:809941/61‑1 TGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA < 1:1515506/61‑1 TGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA < 1:3627742/61‑1 GCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGA < 1:751239/56‑1 TCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA < 1:6009516/52‑1 TCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA < 1:6275735/52‑1 TCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA < 1:1939854/52‑1 TCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA < 1:4872485/52‑1 TCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGAT > 1:4499231/1‑49 TCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGAT > 1:7099254/1‑49 TCACGAGTGCTTTATTAACTGGAGGCGTGACTGCCATTCTTCAGATGAT > 1:7899984/1‑49 CTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA > 1:2857946/1‑43 CTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATA < 1:5191927/41‑1 TTTATTAACTGGATGCGTGATTGCCATTCATCAAATGATAAAGCACTCGTGAAATTTTGCAGGACTGATA > 1:2093933/1‑70 TTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA > 1:2075290/1‑41 TTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA > 1:1972182/1‑41 TTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA > 1:4031116/1‑41 TTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAA > 1:1496538/1‑41 ATTAACTGGATGCGTGACTGCCATTCTTCAGATGA < 1:5736973/35‑1 ATTAACTGGATGCGTGACTGCCATTCTTCAGATGA < 1:7823351/35‑1 ATTAACTGGATGCGTGACTGCCATTCTTCAGATGA < 1:7213669/35‑1 TTAACTGGATGCGTGACTGCCATTCTTCAGATGATA > 1:936034/1‑36 TTAACTGGATGCGTGACTGCCATTCTTCAGATGATA > 1:3244831/1‑36 CGTGACTGCCATTCTTCAGATGATAAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTG < 1:1233890/70‑1 GTGACTGCCATTCTTCAGATGATAAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGG > 1:4714651/1‑70 ATAAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGCAATGGTATCGTGAACAGGAA < 1:5864848/70‑1 TAAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGCAATGGTATCGTGAACAGGAAT < 1:5895031/70‑1 TAAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGCAATGGTATCGTGAACAGGAAT < 1:64751/70‑1 TAAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGCAATGGTATCGTGAACAGGAAT < 1:3918620/70‑1 TAAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGCAATGGTATCGTGAACAGGAAT < 1:3780443/70‑1 TAAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGCAATGGTATCGTGAACAGGAA < 1:3077240/69‑1 AAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCT < 1:5937423/45‑1 AAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCT < 1:7058814/45‑1 AAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGCAATGGTATCGTGAACAG > 1:2672705/1‑64 AAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGCAATGGTATCGTGAAC > 1:288071/1‑62 AAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGC < 1:4555284/47‑1 AAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTC > 1:6678325/1‑43 TCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGataaag‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/4015803‑4015734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAAGCACTCGTGAAATTTTGCAGGACTGATACAGGATACAACTCTGGCAATGGTATCGTGAACAGGAAT > AP009048/4015766‑4015836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |