| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 1356225 = | 89 (1.090) | 11 (0.150) | 3/88 | NT | 11.8% | coding (8/891 nt) coding (960/966 nt) |
sapC sapB |
predicted antimicrobial peptide transporter subunit predicted antimicrobial peptide transporter subunit |
| ? | AP009048 | 1356244 = | 84 (1.150) | coding (941/966 nt) | sapB | predicted antimicrobial peptide transporter subunit | |||||
Only 100 of 113 total aligned reads displayed.
TCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACA > AP009048/1356156‑1356294 | tggctcactggtcattattgttaacgtgatttctgatattttgggtgccatggctaaccctctgaaacat < 1:2363232‑M1/1‑1 (MQ=255) ctcactggtcattattgttaacgtgatttctgatattttgggtgccatggctaaccctctgaaacaTAAgg > 1:5059177‑M1/67‑71 (MQ=255) taAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCa > 1:2283574/1‑70 (MQ=255) aaaaTTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATa > 1:5294027/1‑71 (MQ=255) aaaaTTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATa > 1:2841602/1‑71 (MQ=255) tttGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCAt > 1:3654842/1‑71 (MQ=255) ttGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCAtt > 1:3570792/1‑71 (MQ=255) tGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTc > 1:4128855/1‑71 (MQ=255) cAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTAt > 1:5462004/1‑71 (MQ=255) aGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATg < 1:7782791/71‑1 (MQ=255) aGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATg > 1:2649023/1‑71 (MQ=255) ggCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGt > 1:5907529/1‑71 (MQ=255) ggCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGt > 1:6539930/1‑71 (MQ=255) gTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGttt > 1:151443/1‑69 (MQ=255) gtgatttctgatattttgggtgccatggctaaccctctgaaacaTAAGGCATACCATTCCtt > 1:1100721‑M1/45‑62 (MQ=255) aCGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGc > 1:807090/1‑49 (MQ=255) aCGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCa > 1:6985305/1‑69 (MQ=255) cGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCagag > 1:5168989/1‑71 (MQ=255) cGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCaga < 1:3756694/70‑1 (MQ=255) gCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAgg < 1:4579269/71‑1 (MQ=255) gCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAgg > 1:3722630/1‑71 (MQ=255) cAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAggg > 1:7771288/1‑71 (MQ=255) gCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGt > 1:2146663/1‑70 (MQ=255) gCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGt > 1:1542937/1‑70 (MQ=255) cGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGtt < 1:6559027/60‑1 (MQ=255) tGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGc < 1:671232/71‑1 (MQ=255) gCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCAt < 1:7201044/47‑1 (MQ=255) gCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGc > 1:7502185/1‑70 (MQ=255) gCCCGGCGGGCGCTTTTCGCTGTATACCCTATCGTAAGGCATACCAt < 1:7040530/47‑1 (MQ=255) cccGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGcc < 1:6998939/70‑1 (MQ=255) cccGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCa > 1:3167963/1‑71 (MQ=255) cccGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCa < 1:5255759/71‑1 (MQ=255) ttttgggtgccatggctaaccctctgaaacaTAAGGCATACCATTCCtt > 1:5620359‑M1/32‑49 (MQ=255) ttttgggtgccatggctaaccctctgaaacaTAAGGCATACCATTCCtt > 1:4830553‑M1/32‑49 (MQ=255) tttgggtgccatggctaaccctctgaaacaTAAgg < 1:7895630‑M1/5‑1 (MQ=255) ggcgggcgCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:1271556/71‑1 (MQ=255) ggcgggcgCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:1202339/71‑1 (MQ=255) ggcgggcgCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:6205172/71‑1 (MQ=255) gggcgCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTa < 1:5734258/46‑1 (MQ=255) gggcgCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTa < 1:110681/46‑1 (MQ=255) cgcTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCaga < 1:6987590/52‑1 (MQ=255) gcTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCa > 1:2352901/1‑70 (MQ=255) ccatggctaaccctctgaaacaTAAGGCATACCATTCCt > 1:262671‑M1/23‑39 (MQ=255) ccatggctaaccctctgaaacaTAAGGCATACCATTCCt > 1:3056182‑M1/23‑39 (MQ=255) ccatggctaaccctctgaaacaTAAGGCATACCATTCCt > 1:5025723‑M1/23‑39 (MQ=255) ccatggctaaccctctgaaacaTAAGGCATACCATTCCt > 1:3822497‑M1/23‑39 (MQ=255) cTTTTCGCTGTATACGCTATCGTAAGGCATACCAt > 1:775350/1‑35 (MQ=255) ttttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCaaaa > 1:7933543/1‑71 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATg > 1:4403909/1‑41 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCaga > 1:1795283/1‑48 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCa > 1:1133475/1‑63 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCa > 1:2269676/1‑63 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCa > 1:7601019/1‑63 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCaaaa > 1:7918841/1‑70 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCaaaa > 1:537717/1‑70 (MQ=255) atggctaaccctctgaaacaTAAGGCATACCATTCCTTa < 1:4200277‑M1/19‑1 (MQ=255) atggctaaccctctgaaacaTAAGGCATACCATTCCTTa < 1:4318641‑M1/19‑1 (MQ=255) tCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCAt > 1:4107121/1‑57 (MQ=255) tCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATg > 1:7375090/1‑58 (MQ=255) tCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAata < 1:3051704/70‑1 (MQ=255) tCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATCGCACCCAAAata > 1:1983710/1‑70 (MQ=255) cGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAatat < 1:6956019/70‑1 (MQ=255) cGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAatat < 1:7179959/70‑1 (MQ=255) cTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGc < 1:3904870/51‑1 (MQ=255) cTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGc < 1:4387902/51‑1 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCa > 1:5879490/1‑51 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCa > 1:2346354/1‑51 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 1:1354494/1‑58 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 1:6091123/1‑58 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 1:7508881/1‑58 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 1:2553280/1‑58 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 1:5142848/1‑58 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAc > 1:7344455/1‑57 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAc > 1:6764942/1‑57 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAc > 1:4924984/1‑57 (MQ=255) tataCGCTATCGTAAGGCATACCATTCCTTATGTTTCagag < 1:5758085/41‑1 (MQ=255) ttaCGCTATCGTAAGGCATACCATTCCTTATGTTTCagag < 1:5596801/39‑1 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCag > 1:2353742/1‑37 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAggg > 1:1864918/1‑41 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCa > 1:2003631/1‑65 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCa > 1:7194491/1‑65 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAt < 1:6383943/70‑1 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAt > 1:4199714/1‑70 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAt > 1:425741/1‑70 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAt > 1:3426331/1‑70 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAt > 1:5319024/1‑70 (MQ=255) aCGCTATCGTAAGGCATACCATTCCTTATGTTTCag < 1:6937985/36‑1 (MQ=255) aCGCTATCGTAAGGCATACCATTCCTTATGTTTCag < 1:1333285/36‑1 (MQ=255) aCGCTATCGTAAGGCATACCATTCCTTATGTTTCag < 1:3244070/36‑1 (MQ=255) aCGCTATCGTAAGGCATACCATTCCTTATGTTTCag < 1:612516/36‑1 (MQ=255) aCGCTATCGTAAGGCATACCATTCCTTATGTTTCag < 1:7036871/36‑1 (MQ=255) tATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCa < 1:4156881/67‑1 (MQ=255) tATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCa < 1:7066964/67‑1 (MQ=255) tCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:1668395/44‑1 (MQ=255) tCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:6780605/44‑1 (MQ=255) tCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTaa > 1:139694/1‑71 (MQ=255) tCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTa > 1:5903851/1‑70 (MQ=255) tCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTa < 1:6816009/70‑1 (MQ=255) cGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTaa > 1:1792275/1‑70 (MQ=255) TAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACa < 1:4585053‑M1/70‑1 (MQ=255) | TCACTATAAAATTTGCGCCAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACA > AP009048/1356156‑1356294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |