| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3710900 = | 78 (0.960) | 4 (0.060) | 3/84 | NT | 6.2% | intergenic (+231/‑148) | mioC/gidA | FMN‑binding protein MioC/glucose‑inhibited cell‑division protein |
| ? | AP009048 | 3710925 = | 54 (0.770) | intergenic (+256/‑123) | mioC/gidA | FMN‑binding protein MioC/glucose‑inhibited cell‑division protein | |||||
Only 100 of 102 total aligned reads displayed.
ATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTT > AP009048/3710830‑3710968 | aTGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCtaataa < 1:4712001/71‑1 (MQ=255) gATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCtaataa > 1:2196178/1‑69 (MQ=255) tCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAgaga < 1:3181903/71‑1 (MQ=255) tCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAgaga < 1:7767472/71‑1 (MQ=255) ccTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCtaataa > 1:1231667/1‑66 (MQ=255) tttCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAgaga < 1:3733477/68‑1 (MQ=255) ttCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATca > 1:114358/1‑70 (MQ=255) tCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATcac < 1:1541682/70‑1 (MQ=255) tCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATcac > 1:3657459/1‑70 (MQ=255) tCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATcac > 1:3061248/1‑70 (MQ=255) tCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATcac < 1:2986991/70‑1 (MQ=255) tCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATcac > 1:6675867/1‑70 (MQ=255) tCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATc > 1:1204726/1‑68 (MQ=255) cAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACaa < 1:5533207/70‑1 (MQ=255) cAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACaa < 1:6775858/70‑1 (MQ=255) cAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAAt < 1:5403317/71‑1 (MQ=255) ggTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATcac < 1:1149378/66‑1 (MQ=255) ggTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATca < 1:74722/65‑1 (MQ=255) ggTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATca < 1:6711645/65‑1 (MQ=255) ggTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACaa > 1:2823981/1‑68 (MQ=255) ggTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAg < 1:4539576/71‑1 (MQ=255) gATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCtaataa < 1:7359377/51‑1 (MQ=255) gATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCtaataa < 1:7093368/51‑1 (MQ=255) aTCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCtaataa < 1:7812381/50‑1 (MQ=255) aTCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAaga > 1:3576999/1‑52 (MQ=255) cTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATca > 1:1874064/1‑55 (MQ=255) cTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATc < 1:2633950/54‑1 (MQ=255) cTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATc < 1:4122121/54‑1 (MQ=255) agaaagacctgggatcctgggtattaaaaagaagatctatttatttAGAGATCACAATAGAACAGAtctc > 1:4003611‑M1/47‑70 (MQ=255) aaaaGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACa > 1:7244080/1‑62 (MQ=255) aaaaGCCGGATACTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGAtct > 1:4901951/1‑67 (MQ=255) aaGCCGGATCCTTGTTATCCACAGGGCATTGCGATCCTAATAAGAGATCACAATAGAACAg < 1:5758037/61‑1 (MQ=255) aaGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAg < 1:5645652/61‑1 (MQ=255) aGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCtaaata < 1:5331721/71‑1 (MQ=255) aGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCtaaata < 1:6480593/71‑1 (MQ=255) gCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCtaaataa < 1:5568150/71‑1 (MQ=255) ccGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCtaaataaa > 1:3281769/1‑71 (MQ=255) ctgggatcctgggtattaaaaagaagatctatttatttagag > 1:6487219‑M1/39‑42 (MQ=255) cGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTaaataaat < 1:4524265/71‑1 (MQ=255) ggATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGAt > 1:7427447/1‑58 (MQ=255) ggATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCtaaataa < 1:6653883/68‑1 (MQ=255) gATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATcaca > 1:1078472/1‑46 (MQ=255) gATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAg < 1:6241831/71‑1 (MQ=255) aTCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGa < 1:5926316/71‑1 (MQ=255) ccTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGAtc > 1:5730679/1‑71 (MQ=255) ttGTTATCCACAGGTCAGTTCGATCCTAATAAGAGATCACAATAGAACAGATCTCtaaataa < 1:6504302/62‑1 (MQ=255) tGTTATCCTCAGGGCACTGCGATCCTATTTAGAGATCACAATAGaa < 1:4058647/46‑1 (MQ=255) tGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGaa < 1:3466120/46‑1 (MQ=255) tGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGaa < 1:2017392/46‑1 (MQ=255) tGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGAtc < 1:1683974/52‑1 (MQ=255) tGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGAtc < 1:5329435/52‑1 (MQ=255) gTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGAtc < 1:7923756/51‑1 (MQ=255) gTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCtaaataaa > 1:6169951/1‑61 (MQ=255) ttATCCACAGGGCAGTGCGATCCTAATAAGAGATCACaa < 1:944704/39‑1 (MQ=255) ttATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATcttctt > 1:1742984/1‑71 (MQ=255) aTCCACAGGGCAGTGGGATCCTAATAAGAGATCACAATAg < 1:5521199/40‑1 (MQ=255) aTCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAg < 1:786680/40‑1 (MQ=255) aTCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAg < 1:1219189/40‑1 (MQ=255) tCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCttttt < 1:5748373/71‑1 (MQ=255) tCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCtttt < 1:7642291/70‑1 (MQ=255) ccACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTaaataaat > 1:6639845/1‑57 (MQ=255) ttaaaaagaagatctatttatttAGAGATCACAATAGAACAGAt > 1:1012961‑M1/24‑44 (MQ=255) cacaGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGAt > 1:40423/1‑44 (MQ=255) cacaGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCta < 1:2138325/49‑1 (MQ=255) cacaGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCtttt > 1:3614188/1‑68 (MQ=255) cacaGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTaa > 1:7153064/1‑71 (MQ=255) acaGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAAt < 1:4032291/71‑1 (MQ=255) acaGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAAt < 1:164102/71‑1 (MQ=255) acaGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAAt < 1:1040354/71‑1 (MQ=255) acaGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAAt < 1:6531158/71‑1 (MQ=255) aGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATAc < 1:3437116/71‑1 (MQ=255) gggCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATAcc < 1:4247591/71‑1 (MQ=255) aaagaagatctatttatttAGAGATCACAATacaaca < 1:5231159‑M1/18‑1 (MQ=255) aaagaagatctatttatttAGAGATCACAATAGAACa < 1:2678580‑M1/18‑1 (MQ=255) ggCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTaaataaat < 1:3606417/51‑1 (MQ=255) cAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCtttt < 1:232588/61‑1 (MQ=255) aGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAgg < 1:615470/71‑1 (MQ=255) gTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGa < 1:3174438/71‑1 (MQ=255) tGCGATCCTAATAAGAGATCACAATAGAACAGATCTCtaaata < 1:1317310/43‑1 (MQ=255) tGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGAt < 1:2121216/71‑1 (MQ=255) gCGATCCTAATAAGAGATCACAATAGAACAGATCTCtaaataaa > 1:1493269/1‑44 (MQ=255) gCGATCCTAATAAGAGATCACAATAGAACAGATCTCtaaataaa > 1:1795546/1‑44 (MQ=255) cGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATcc > 1:4919063/1‑71 (MQ=255) cGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATcc < 1:3453312/71‑1 (MQ=255) gATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATccc < 1:4653341/71‑1 (MQ=255) tCCTAATAAGAGATCACAATAGAACAGATCTCTaaataaat > 1:5317844/1‑41 (MQ=255) tCCTAATAAGAGATCACAATAGAACAGATCTCTaaataaat > 1:7586706/1‑41 (MQ=255) cTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATcttctt < 1:2074294/49‑1 (MQ=255) cTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATcttctt < 1:5620875/49‑1 (MQ=255) cTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATcttctt < 1:77160/49‑1 (MQ=255) cTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAg < 1:1121353/61‑1 (MQ=255) cTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATc < 1:6279685/65‑1 (MQ=255) taataaGAGATCACAATAGAACAGATCTCTAAATAAATAGAtc < 1:4022118/43‑1 (MQ=255) taataaGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCttt < 1:1919025/49‑1 (MQ=255) taataaGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCttt < 1:5280323/49‑1 (MQ=255) aataaGAGATCACAATAGAACAGATCTCTAAATAAATAGAt > 1:5699203/1‑41 (MQ=255) aataaGAGATCACAATAGAACAGATCTCTAAATAAATAGAt > 1:1624364/1‑41 (MQ=255) ataaGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCtttt > 1:4019752/1‑48 (MQ=255) ataaGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCtt < 1:3159994/71‑1 (MQ=255) aaGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCttt > 1:6091788/1‑70 (MQ=255) | ATGATCCTTTCCAGGTTGTTGATCTTAAAAGCCGGATCCTTGTTATCCACAGGGCAGTGCGATCCTAATAAGAGATCACAATAGAACAGATCTCTAAATAAATAGATCTTCTTTTTAATACCCAGGATCCCAGGTCTTT > AP009048/3710830‑3710968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |