| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3956607 | 71 (0.870) | 5 (0.080) | 4/80 | NT | 6.8% | coding (1772/1950 nt) | yhjK | predicted diguanylate cyclase |
| ? | AP009048 | = 3956617 | 80 (1.200) | coding (1782/1950 nt) | yhjK | predicted diguanylate cyclase | |||||
Only 100 of 150 total aligned reads displayed.
TCGTTGCCAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTGAAGCA > AP009048/3956537‑3956677 | tCGTTGCCAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGAT > 1:2925604‑M1/1‑71 (MQ=255) ttGCCAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATtgc < 1:6130107/71‑1 (MQ=255) gCCAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATtgct < 1:5841583/70‑1 (MQ=255) gCCAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATtgc < 1:4427122/69‑1 (MQ=255) ccAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATtgctgc < 1:4820890/71‑1 (MQ=255) cAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATtgctgc > 1:5853261/1‑70 (MQ=255) cAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATtgctgc > 1:6600371/1‑70 (MQ=255) aTCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAAt > 1:5917473/1‑71 (MQ=255) tCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAAtt < 1:1609955/71‑1 (MQ=255) cGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTa < 1:7176758‑M2/71‑2 (MQ=255) gACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTat < 1:5723372‑M2/71‑3 (MQ=255) gACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTat < 1:1738422‑M2/71‑3 (MQ=255) gACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTat < 1:5732302‑M2/71‑3 (MQ=255) gACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATAGCTGCAATTa > 1:7420677‑M2/1‑69 (MQ=255) aCGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTatc > 1:5115416‑M2/1‑68 (MQ=255) aCGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTatc > 1:6424263‑M2/1‑68 (MQ=255) cGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTatc > 1:4765485‑M2/1‑67 (MQ=255) gTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCTGGGAGATAGCAGCATGATtgct < 1:2461408/60‑1 (MQ=255) gTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGAtt < 1:7301000/57‑1 (MQ=255) cTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATtgct > 1:6065998/1‑57 (MQ=255) cTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTatcatgct > 1:2473709‑M2/1‑63 (MQ=255) cTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTatcatgc > 1:412422‑M2/1‑63 (MQ=255) cTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTatcatgc > 1:6476753‑M2/1‑63 (MQ=255) cTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGAT > 1:4447828‑M1/1‑53 (MQ=255) tGAAAATCGACAAAATGTTTGTTGAAGGCTTGCTGGGAGATAGCAGCATGATTGCTGCAATTatcatgct < 1:767669‑M2/70‑9 (MQ=255) tGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGAtt < 1:6773219/53‑1 (MQ=255) gAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATtg > 1:5485091/1‑53 (MQ=255) gAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTgg > 1:5583722/1‑71 (MQ=255) aTCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATaattgcagcaatcatg < 1:4369446‑M1/63‑17 (MQ=255) aTCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCa < 1:574715/71‑1 (MQ=255) tCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGgcg > 1:2677006/1‑68 (MQ=255) gACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCagag > 1:5343060/1‑71 (MQ=255) gACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCaga > 1:2605681/1‑70 (MQ=255) cAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGcc < 1:6656379/71‑1 (MQ=255) aaaaTGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGgcg < 1:6957081/63‑1 (MQ=255) aaTGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGgcg < 1:3455279/61‑1 (MQ=255) aaTGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGa < 1:2962742/71‑1 (MQ=255) aTGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGgc > 1:5608082/1‑59 (MQ=255) aTGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGgc > 1:1501769/1‑59 (MQ=255) aTGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGgc > 1:1509538/1‑59 (MQ=255) aTGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGaa > 1:5199146/1‑71 (MQ=255) tgtttgttGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGgcg > 1:7217188/1‑59 (MQ=255) tgtttgttGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAAc > 1:7377488/1‑71 (MQ=255) gtttgttGAAGGCTTGCCGGGAGATAGCAGCATGATaattgcagcaat < 1:2189826‑M1/48‑13 (MQ=255) gtttgttGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGATCCTGAACt > 1:5002813/1‑71 (MQ=255) tttgttGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACtt < 1:3708623/71‑1 (MQ=255) tgttgAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAAtt > 1:7609687/1‑43 (MQ=255) ttgAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACaa < 1:167779/71‑1 (MQ=255) ttgAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACaa < 1:4932606/71‑1 (MQ=255) ttgAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACa < 1:6206321/70‑1 (MQ=255) gAAGGCTTGCCGGGAGATAGCAGCATGATaattgcagcaatcatgc > 1:4115063‑M1/1‑29 (MQ=255) gAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTatcatgc > 1:5252047‑M2/1‑39 (MQ=255) aaGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCATAGCCTGAACTTACAAAt < 1:3144935/70‑1 (MQ=255) ggCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACtt < 1:2359471/62‑1 (MQ=255) ggCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGAt < 1:2562124/71‑1 (MQ=255) cTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTg > 1:1039205/1‑71 (MQ=255) ttGCCGGTAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAAc > 1:4831004/1‑57 (MQ=255) ttGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAAc > 1:2702750/1‑57 (MQ=255) ttGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAAc > 1:4421546/1‑57 (MQ=255) gCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGcc > 1:3078557/1‑70 (MQ=255) ggAGATAGCAGCATGATTTCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAgg < 1:105169/71‑1 (MQ=255) ggAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAgg > 1:4127763/1‑71 (MQ=255) agaTAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCg > 1:1890202/1‑71 (MQ=255) gaTAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGt > 1:7162509/1‑71 (MQ=255) gaTAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGt < 1:2434013/71‑1 (MQ=255) aTAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTg < 1:740272/71‑1 (MQ=255) agcagcATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTgg > 1:7848078/1‑70 (MQ=255) gcagcaTGATTGCTGCAATTATCATGCTGGCGGAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGga < 1:7885326/70‑1 (MQ=255) gcagcaTGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTg > 1:6546730/1‑68 (MQ=255) gcagcaTGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTg > 1:1176166/1‑68 (MQ=255) gcagcaTGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGgag < 1:7753817/71‑1 (MQ=255) gcagcaTGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGga < 1:3513264/70‑1 (MQ=255) gcagcaTGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGga < 1:3939706/70‑1 (MQ=255) agcaTGATaattgcagcaatcatgctgctatctcccagcaagccttcaacaaacattttgtcgattttca < 1:767669‑M1/70‑63 (MQ=255) gcaTGATaattgcagcaatcatgctgctatctcccggcaagccttc > 1:2167331‑M1/1‑7 (MQ=255) gcaTGATaattgcagcaatcatgctgctatctcccggcaagccttc > 1:5252047‑M1/1‑7 (MQ=255) gcaTGATTGCTGCAATTatcatgctgctatctcccggcaagccttc > 1:4115063‑M2/1‑17 (MQ=255) gcaTGATTGCTGCAATTatcatgctgctatctcccggcaagccttc > 1:1424831‑M2/1‑17 (MQ=255) gcaTGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAg < 1:5943387/60‑1 (MQ=255) gcaTGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACt > 1:354495/1‑71 (MQ=255) gcaTGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACt < 1:394765/71‑1 (MQ=255) caTGATaattgcagcaatcatgctgctatctcccggcaagccttcaacaaacattttgtcgattttcagta < 1:7467384‑M1/71‑66 (MQ=255) caTGATTGCTGCAATTatcatgctgctatctcccggcaagccttcaacaaacattttgtcgat < 1:4369446‑M2/63‑48 (MQ=255) caTGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATg < 1:2343093/49‑1 (MQ=255) caTGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTg < 1:630747/71‑1 (MQ=255) aTGATaattgcagcaatcatgctgctatctcccggcaagccttcaacaaacattttgtcgattttc > 1:2649748‑M1/1‑5 (MQ=255) aTGATTGCTGCAATTatcatgctgctatctcccggcaagccttcaa < 1:1914726‑M2/46‑32 (MQ=255) tGATTGCTGCAATTATCATGCTGGCGCAGAGCCTg < 1:899359/35‑1 (MQ=255) tGATTGCTGCAATTATCATGCTGGCGCAGAGCCTg < 1:4501243/35‑1 (MQ=255) tGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTg > 1:1203725/1‑69 (MQ=255) tGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTGaa < 1:1430998/71‑1 (MQ=255) tGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTGaa < 1:7470491/71‑1 (MQ=255) gATaattgcagcaatcatgctgctatctcccggcaagccttcaacaaacattttgtcgattttcagtacg > 1:4765485‑M1/1‑3 (MQ=255) gATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGc > 1:6464663/1‑51 (MQ=255) aTaattgcagcaatcatgctgctatctcccggcaagccttcaacaaacattttgtcgattttcagtacgtc < 1:5723372‑M1/71‑70 (MQ=255) aTTGCTGCAATTatcatgctgctatctcccggcaagccttcaacaaac < 1:2189826‑M2/48‑37 (MQ=255) aTTGCTGCAATTATCATGCTGGGGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTGAAGc < 1:881842/71‑1 (MQ=255) aTTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTg < 1:7740139/67‑1 (MQ=255) aTTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTGAAGc < 1:7106006/71‑1 (MQ=255) taattgcagcaatcatgctgctatctcccggcaagccttcaacaaacat < 1:6479945‑M1/49‑49 (MQ=255) | TCGTTGCCAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTGAAGCA > AP009048/3956537‑3956677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |