| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 4047710 = | 122 (1.500) | 5 (0.070) | 3/86 | NT | 5.0% | intergenic (+19/‑380) | livF/ugpB | leucine/isoleucine/valine transporter subunit/glycerol‑3‑phosphate transporter subunit |
| ? | AP009048 | 4047726 = | 81 (1.130) | intergenic (+35/‑364) | livF/ugpB | leucine/isoleucine/valine transporter subunit/glycerol‑3‑phosphate transporter subunit | |||||
Only 100 of 161 total aligned reads displayed.
TGATGCGCTGCTGGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTA > AP009048/4047640‑4047780 | cactcacccagtaggcctgataagcgcagcgcatcaggcaattttacatttgtcacctgtctcaaaGGAGt < 1:1987042‑M1/5‑1 (MQ=255) actcacccagtaggcctgataagcgcagcgcatcaggcaattttacatttgtcacctgtctcaaaGGAGTc < 1:389430‑M1/6‑1 (MQ=255) ctgctgGCGAATGAAGCGGTGAGAAGTGCGTATTTAGTCGGGTAATAACACGTTGATTGATAGGGAGTCaa < 1:1166798/71‑1 (MQ=255) ctgctgGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaa < 1:852005/71‑1 (MQ=255) ctgctgGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaa < 1:4249995/71‑1 (MQ=255) ctgctgGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaa < 1:5973411/71‑1 (MQ=255) ctgctgGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaa < 1:2193569/71‑1 (MQ=255) ctgctgGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaa < 1:7202116/71‑1 (MQ=255) gctgGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaa > 1:5536236/1‑69 (MQ=255) ctgGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaaaa < 1:5449491/70‑1 (MQ=255) ctgGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAg < 1:3643670/71‑1 (MQ=255) tgGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaa < 1:2825292/67‑1 (MQ=255) ggCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGAc > 1:6520980/1‑71 (MQ=255) gCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaaaa > 1:4916898/1‑67 (MQ=255) gCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaaaa > 1:5931955/1‑67 (MQ=255) gCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACt > 1:2393633/1‑71 (MQ=255) gAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTcc > 1:4565499/1‑71 (MQ=255) aaTGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCt < 1:7164244/71‑1 (MQ=255) aTGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAgg > 1:5758967/1‑54 (MQ=255) aTGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCtt < 1:796464/71‑1 (MQ=255) aGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCttt > 1:6514738/1‑68 (MQ=255) aGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCttt > 1:6505301/1‑68 (MQ=255) aGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCt < 1:5298518/66‑1 (MQ=255) gCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTgaga < 1:3732177/71‑1 (MQ=255) cGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTgaga > 1:2280374/1‑70 (MQ=255) cGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGAc < 1:5561215/71‑1 (MQ=255) cGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTACTTTGAGAc < 1:6689807/71‑1 (MQ=255) ataagcgcagcgcatcaggcaattttacatttgtcacctgtctcaaag > 1:1626114‑M1/48‑48 (MQ=255) gTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGTGAGTCaa < 1:2395528/53‑1 (MQ=255) gTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaa < 1:215059/53‑1 (MQ=255) tGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAgg < 1:262980/71‑1 (MQ=255) gagaAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCtt < 1:6150613/61‑1 (MQ=255) gagaAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCtt < 1:6887242/61‑1 (MQ=255) agaAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGt > 1:711956/1‑70 (MQ=255) cagcgcatcaggcaattttacatttgtcacctgtctcaaaGGAGTCAAAAGACTCCtt > 1:6998924‑M1/41‑58 (MQ=255) aaGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGa > 1:2544266/1‑70 (MQ=255) aGTGCGTATTTAGGCGGGTAATAACACGTTGATTGACAGGGAGTCaa < 1:13749/47‑1 (MQ=255) gTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaaaa > 1:3854334/1‑48 (MQ=255) gTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaaaa < 1:5053432/48‑1 (MQ=255) gTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCaaaa > 1:3600029/1‑48 (MQ=255) gTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACaa < 1:7288230/71‑1 (MQ=255) cgcatcaggcaattttacatttgtcacctgtctcaaaGGAGTc < 1:1438216‑M1/6‑1 (MQ=255) cGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATg < 1:2469532/71‑1 (MQ=255) gTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGa > 1:3401001/1‑46 (MQ=255) gTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGa > 1:583698/1‑46 (MQ=255) gTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGa > 1:2444582/1‑46 (MQ=255) gTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGa > 1:726657/1‑46 (MQ=255) tATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGt > 1:6425180/1‑70 (MQ=255) aTTTAGGCGGGTAATAACACGTTGATTGATAGGGAGt > 1:6089395/1‑37 (MQ=255) aTTTAGGCGGGTAATAACACGTTGATTGATAGGGAGt > 1:902847/1‑37 (MQ=255) aTTAAGGCGGGTAATAACACGTTGATTGATAGGGAGt > 1:1783163/1‑37 (MQ=255) tttAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTaaa < 1:1340872/71‑1 (MQ=255) tttAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTaaa < 1:1331585/71‑1 (MQ=255) tttAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTaa < 1:1816598/70‑1 (MQ=255) tttAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTaa < 1:1188640/70‑1 (MQ=255) ttAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGaaatc > 1:7775312/1‑69 (MQ=255) ggcaattttacatttgtcacctgtctcaaaGGAGTCaaaa < 1:3990583‑M1/10‑1 (MQ=255) ggcaattttacatttgtcacctgtctcaaaGGAGTCaaaa < 1:1668971‑M1/10‑1 (MQ=255) ggcaattttacatttgtcacctgtctcaaaGGAGTCaaaa < 1:2077699‑M1/10‑1 (MQ=255) tAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTaaaa > 1:4734785/1‑70 (MQ=255) gcaattttacatttgtcacctgtctcaaaGGAGTCAAAAGACTCCttt < 1:3820498‑M1/19‑1 (MQ=255) caattttacatttgtcacctgtctcaaaGGAGTCAAAAGACTCCttt < 1:4491324‑M1/19‑1 (MQ=255) aGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACaaa > 1:7727527/1‑62 (MQ=255) aGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTaa < 1:3656224/67‑1 (MQ=255) gCGGGTTATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTaaaa > 1:1025239/1‑67 (MQ=255) gCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGc < 1:2864990/71‑1 (MQ=255) ttttacatttgtcacctgtctcaaaGGAGTCAAAAGACTCCtt > 1:1062748‑M1/26‑43 (MQ=255) cGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGcc < 1:1654329/71‑1 (MQ=255) taataaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGAt > 1:7608847/1‑71 (MQ=255) aataaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTg > 1:5011596/1‑49 (MQ=255) aataaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTg > 1:3626556/1‑49 (MQ=255) ataaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTg < 1:2006310/67‑1 (MQ=255) ataaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTg < 1:3024280/67‑1 (MQ=255) ataaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGAtgc > 1:296752/1‑71 (MQ=255) taaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTga < 1:557950/39‑1 (MQ=255) taaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTga < 1:7063951/39‑1 (MQ=255) taaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGa < 1:5982591/67‑1 (MQ=255) taaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGAtgc > 1:6399563/1‑70 (MQ=255) aaCACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGAtgcgc > 1:338011/1‑71 (MQ=255) acacGTTGATTGATAGGGAGTCAAAAGACTCCttt > 1:2801537/1‑35 (MQ=255) acacGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGAtgcgct > 1:4641452/1‑71 (MQ=255) cacGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGAtgcgc > 1:4355159/1‑69 (MQ=255) acGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACaa > 1:780562/1‑47 (MQ=255) acGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGc > 1:2684158/1‑59 (MQ=255) gTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAAt > 1:5204068/1‑54 (MQ=255) tgattgatAGGGAGTCAAAAGACTCCTTTGAGACAGGt > 1:603007/1‑38 (MQ=255) tgattgatAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGAtgcgctgcgc > 1:864679/1‑69 (MQ=255) tgattgatAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATgcgctgcgct > 1:1780604/1‑70 (MQ=255) gattgatAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCtt < 1:7477985/70‑1 (MQ=255) attgatAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTAt < 1:7363920/71‑1 (MQ=255) ttgatAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTa < 1:3523462/45‑1 (MQ=255) ttgatAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTa < 1:7730903/45‑1 (MQ=255) ttgatAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTAt < 1:2203800/70‑1 (MQ=255) tgatAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAAt < 1:5404823/41‑1 (MQ=255) gatAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAg > 1:2440496/1‑71 (MQ=255) tAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAAt < 1:6661995/45‑1 (MQ=255) tAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAAt < 1:2677744/45‑1 (MQ=255) gggAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGcc < 1:187619/70‑1 (MQ=255) gggAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGACTGAtgcgct < 1:4035668/56‑1 (MQ=255) GGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTa < 1:1102764‑M1/71‑1 (MQ=255) | TGATGCGCTGCTGGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAATAACACGTTGATTGATAGGGAGTCAAAAGACTCCTTTGAGACAGGTGACAAATGTAAAATTGCCTGATGCGCTGCGCTTATCAGGCCTA > AP009048/4047640‑4047780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |