| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 81461 | 83 (1.020) | 5 (0.070) | 3/86 | NT | 5.8% | coding (498/1092 nt) | leuB | 3‑isopropylmalate dehydrogenase |
| ? | AP009048 | = 81467 | 89 (1.250) | coding (492/1092 nt) | leuB | 3‑isopropylmalate dehydrogenase | |||||
Only 100 of 141 total aligned reads displayed.
GCGACGCTTGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGAAATAGATGCCGC > AP009048/81398‑81534 | gCGACGCTTGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGg > 1:1157667‑M2/1‑70 (MQ=255) gACGCTTGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgta < 1:3083527‑M2/71‑4 (MQ=255) gACGCTTGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgta < 1:3324110‑M2/71‑4 (MQ=255) gACGCTTGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGg > 1:5931018‑M2/1‑68 (MQ=255) cGCTTGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgtat < 1:7033047‑M2/70‑5 (MQ=255) gCTTGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgtatca > 1:4012126‑M2/1‑65 (MQ=255) cTTGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCaa < 1:7723418/71‑1 (MQ=255) ttGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCTATCTCAAAACGGTGATACACCTCGgtatca < 1:1619478‑M2/69‑7 (MQ=255) ttGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgtatca < 1:4749290‑M2/69‑7 (MQ=255) ttGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgtatca < 1:4169076‑M2/69‑7 (MQ=255) tGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgt > 1:2249825‑M2/1‑62 (MQ=255) tGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAg > 1:3554956/1‑71 (MQ=255) cGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgtat < 1:4533120‑M2/64‑5 (MQ=255) gAGCAGATTCAAACGCGATGCGGGCAATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAg < 1:4577563/68‑1 (MQ=255) cAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCtttt > 1:4309366/1‑71 (MQ=255) aTTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCg > 1:723091/1‑53 (MQ=255) aTTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgtatca > 1:4158338‑M2/1‑53 (MQ=255) aTTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgtatca > 1:3477758‑M2/1‑53 (MQ=255) aTTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgtatca > 1:563758‑M2/1‑53 (MQ=255) aTTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAg < 1:1461856/62‑1 (MQ=255) aTTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCa > 1:7587274/1‑71 (MQ=255) ttCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgtat > 1:3272676‑M2/1‑52 (MQ=255) ttCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGgtat > 1:4352793‑M2/1‑52 (MQ=255) ttCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCa < 1:1217908/70‑1 (MQ=255) tCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGTTTTTTCa > 1:6390213/1‑69 (MQ=255) tCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCata > 1:4887983/1‑71 (MQ=255) cAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAATGCTTTTTc < 1:5478595/67‑1 (MQ=255) cAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCatat > 1:1116978/1‑71 (MQ=255) cAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCata < 1:4554249/70‑1 (MQ=255) aaaCGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCatat < 1:3872535/70‑1 (MQ=255) aaCGCTATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCtttt < 1:1213377/63‑1 (MQ=255) aaCGCGATGCGGGCGATACGTTCGATCTCAAAACTGTGATACACCTCGGTATCAAAGGCTTTTTCATATTg < 1:1178143/71‑1 (MQ=255) aaCGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCtttt < 1:7107495/63‑1 (MQ=255) aaCGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCtttt < 1:7486580/63‑1 (MQ=255) aCGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGg < 1:6481702‑M2/48‑2 (MQ=255) aCGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGg < 1:2138041‑M2/48‑2 (MQ=255) aCGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGg < 1:5445909‑M2/48‑2 (MQ=255) gcgATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCg < 1:197299/45‑1 (MQ=255) gcgATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCg < 1:1834671/45‑1 (MQ=255) gcgATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCg < 1:1821970/45‑1 (MQ=255) aTGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCt < 1:4853585/71‑1 (MQ=255) tGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTa > 1:7407178/1‑71 (MQ=255) tGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTa > 1:2974111/1‑71 (MQ=255) tGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTa > 1:3344923/1‑71 (MQ=255) cGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTAcc < 1:341120/71‑1 (MQ=255) gggCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCt < 1:6333653/71‑1 (MQ=255) cGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCttt < 1:1364232/49‑1 (MQ=255) cGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCttt < 1:1354561/49‑1 (MQ=255) cGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTcg < 1:4305841/71‑1 (MQ=255) aTACGTTCGATCTCAAAACGGTGATACACCTCGgtatca > 1:5169385‑M2/1‑33 (MQ=255) tACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCgg > 1:1787470/1‑71 (MQ=255) aCGTTCGATCTCAAAACGGTGATACACCTCGGTATCaaa > 1:7663440/1‑39 (MQ=255) aCGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGc > 1:5165702/1‑71 (MQ=255) cGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGcc > 1:210617/1‑71 (MQ=255) gTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCt > 1:5360465/1‑71 (MQ=255) tCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCttt > 1:779201/1‑71 (MQ=255) cGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCttt > 1:7659470/1‑70 (MQ=255) cGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCttt < 1:7912637/70‑1 (MQ=255) gATCTCAAAACGGTGATACACCTCGGTATCAAAgg > 1:6610187/1‑35 (MQ=255) aTCTCAAAACGGTGATACACCTCGGTATCAAAGGCttttt < 1:950406/40‑1 (MQ=255) aTCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTgg > 1:1994786/1‑71 (MQ=255) tctcAAAACGGTGATACACCTCGGTATCAAAGGCttttt < 1:7061345/39‑1 (MQ=255) ctcAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCt > 1:6753299/1‑71 (MQ=255) tcAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCtttt < 1:1477950/66‑1 (MQ=255) aaaaCGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCt < 1:7543245/68‑1 (MQ=255) aaaaCGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTg < 1:6956999/69‑1 (MQ=255) aaaaCGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGa < 1:3575861/70‑1 (MQ=255) aaaaCGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGAc > 1:4609871/1‑71 (MQ=255) aaaaCGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGAc > 1:6965478/1‑71 (MQ=255) aaCGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCg < 1:1061004/71‑1 (MQ=255) aCGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGa < 1:2417808/71‑1 (MQ=255) aCGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGa < 1:5949327/71‑1 (MQ=255) cGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGaa < 1:5940024/71‑1 (MQ=255) ggTGATACACCTCGGTATCAAAGGCTTTTTCATAtt > 1:2975414/1‑36 (MQ=255) ggTGATACACCTCGGTATCAAAGGCTTTTTCATAtt > 1:1596724/1‑36 (MQ=255) ggTGATACACCTCGGTATCAAAGGCTTTTTCATAtt > 1:5202199/1‑36 (MQ=255) ggTGATACACCTCGGTATCAAAGGCTTTTTCATAtt > 1:2615994/1‑36 (MQ=255) ggTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGaaa < 1:2410816/71‑1 (MQ=255) ggTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGaaa < 1:6787297/71‑1 (MQ=255) tGATACACCTCGgtatcaccgttttgagatcgaacgtatcgcccgcatcgcgtttgaa < 1:2609366‑M2/58‑47 (MQ=255) tGATACACCTCGgtatcaccgttttgagatcgaacgtatcgcccgcatcgcgtttgaa < 1:881287‑M2/58‑47 (MQ=255) tGATACACCTCGgtatcaccgttttgagatcgaacgtatcgcccgca > 1:2578724‑M2/1‑12 (MQ=255) aTACACCTCGgtatcaccgttttgagatcgaacgtatcgccc < 1:2267132‑M2/42‑33 (MQ=255) aTACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTc > 1:313464/1‑45 (MQ=255) aTACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCTAAATAg < 1:1026892/70‑1 (MQ=255) aTACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGAAATAg < 1:2839529/70‑1 (MQ=255) tACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCttt < 1:2276509/53‑1 (MQ=255) tACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTgg < 1:6209752/56‑1 (MQ=255) tACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGAAATAGAt > 1:5896591/1‑71 (MQ=255) acacCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTa < 1:5867961/38‑1 (MQ=255) acacCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTa < 1:3208900/38‑1 (MQ=255) acacCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCtt < 1:7795419/42‑1 (MQ=255) acacCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTcgcg < 1:829029/46‑1 (MQ=255) acCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGAAATAGATgcc > 1:4127489/1‑71 (MQ=255) acCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGAAATAGATgc > 1:113860/1‑70 (MQ=255) ccTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGc > 1:4990483/1‑53 (MQ=255) ccTCGGTATCAAAGGCTTTTTCATATTGTCAGCTACCTTCGCGGCCTTTTGGCTGACCGAAATAGATgccg < 1:2755604/71‑1 (MQ=255) cTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGAAATAGATgccgc > 1:5590595/1‑71 (MQ=255) cTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGAAATAGATgccgc < 1:157952/71‑1 (MQ=255) cTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGAAATAGATgccgc > 1:3861464/1‑71 (MQ=255) | GCGACGCTTGCGAGCAGATTCAAACGCGATGCGGGCGATACGTTCGATCTCAAAACGGTGATACACCTCGGTATCAAAGGCTTTTTCATATTGTCCGCTACCTTCGCGGCCTTTTGGCTGACCGAAATAGATGCCGC > AP009048/81398‑81534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |