| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 390073 = | 135 (1.660) | 10 (0.140) | 6/84 | NT | 8.7% | coding (599/1461 nt) | yaiT | hypothetical protein |
| ? | AP009048 | 390095 = | 93 (1.330) | coding (621/1461 nt) | yaiT | hypothetical protein | |||||
Only 100 of 151 total aligned reads displayed.
CACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACAC > AP009048/390027‑390163 | cacacaAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAata > 1:1449736/1‑70 (MQ=255) acacaAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATAtt < 1:4759863/71‑1 (MQ=255) ttgagataatgcaatacctgcaacgcgggagttattggaaataTTGATGTAGAAAGTAACATCAat > 1:4001859‑M1/44‑66 (MQ=255) acaAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTc < 1:6415117/71‑1 (MQ=255) acaAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTc > 1:5041689/1‑71 (MQ=255) caAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc < 1:7162099/71‑1 (MQ=255) caAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc < 1:7674084/71‑1 (MQ=255) caAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTc > 1:569638/1‑70 (MQ=255) aaaTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc > 1:5296346/1‑70 (MQ=255) aaTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATAtt < 1:4712569/66‑1 (MQ=255) aaTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCaa < 1:6681638/71‑1 (MQ=255) gaCATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAatat < 1:4484764/60‑1 (MQ=255) gaCATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAatat < 1:5883279/60‑1 (MQ=255) gaCATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACt > 1:6257445/1‑71 (MQ=255) aCATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTc < 1:2616425/71‑1 (MQ=255) gcaatacctgcaacgcgggagttattggaaataTTGATGTAGAAAGTAACATCAat < 1:3872011‑M1/23‑1 (MQ=255) cATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATAttt > 1:6179443/1‑60 (MQ=255) aTTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTccc > 1:6151477/1‑71 (MQ=255) tttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcg < 1:6176177/71‑1 (MQ=255) ttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgc > 1:4230815/1‑71 (MQ=255) tGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgcg > 1:3977408/1‑71 (MQ=255) gATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGt > 1:6371287/1‑71 (MQ=255) gATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGt > 1:810196/1‑71 (MQ=255) tACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTg < 1:3050066/71‑1 (MQ=255) aCAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTg > 1:1889437/1‑70 (MQ=255) aaGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAg > 1:4330517/1‑71 (MQ=255) aGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAAt < 1:6452371/54‑1 (MQ=255) aGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAAt < 1:3758079/54‑1 (MQ=255) aGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAAt < 1:3302742/54‑1 (MQ=255) gTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAgg > 1:5641529/1‑70 (MQ=255) gTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGt < 1:7465897/71‑1 (MQ=255) tGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTg > 1:7763279/1‑65 (MQ=255) tGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTa > 1:2297589/1‑71 (MQ=255) gAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAata > 1:2710775/1‑43 (MQ=255) gAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTAt > 1:3794355/1‑71 (MQ=255) aaGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATAttt > 1:953494/1‑45 (MQ=255) aaGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATAttt > 1:6800132/1‑45 (MQ=255) aaGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATAttt > 1:4885339/1‑45 (MQ=255) aaGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATAttt > 1:6809437/1‑45 (MQ=255) aaGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTAtt > 1:4260093/1‑71 (MQ=255) aaGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTAtt > 1:4620395/1‑71 (MQ=255) aGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTg > 1:5750690/1‑71 (MQ=255) ggCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTg > 1:7031014/1‑70 (MQ=255) gCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCac < 1:2773774/46‑2 (MQ=255) gCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCaa < 1:7732881/46‑1 (MQ=255) cGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCaa < 1:7642698/45‑1 (MQ=255) cGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCAt < 1:7241754/71‑1 (MQ=255) agttattggaaatcTTGATGTAGAAAGTAACATCAATAtt < 1:4731876‑M1/26‑1 (MQ=255) gTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc > 1:3584622/1‑42 (MQ=255) gTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc < 1:4457281/42‑1 (MQ=255) ttGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc < 1:3525385/41‑1 (MQ=255) ttGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTa > 1:2702919/1‑71 (MQ=255) tGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAt > 1:279981/1‑71 (MQ=255) gCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtc > 1:2310220/1‑71 (MQ=255) cTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCaa > 1:2852975/1‑40 (MQ=255) cTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgc > 1:4589937/1‑50 (MQ=255) cTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtct > 1:4386981/1‑71 (MQ=255) cTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtct < 1:730682/71‑1 (MQ=255) tGTTAATCTTGATGTAGAAAGTAACATCAATAttt < 1:520094/35‑1 (MQ=255) ttAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtctc < 1:241723/69‑1 (MQ=255) ttAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtctc > 1:2074820/1‑69 (MQ=255) ttAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtctc > 1:3173456/1‑69 (MQ=255) ttAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtctc > 1:3173995/1‑69 (MQ=255) ttAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCaa < 1:975956/71‑1 (MQ=255) ttAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCa < 1:7071678/70‑1 (MQ=255) tAATCTTGATGTAGAAAGTAACATCAATATTTCCaa > 1:4074924/1‑36 (MQ=255) tAATCTTGATGTAGAAAGTAACATCAATATTTCCaa > 1:264269/1‑36 (MQ=255) tAATCTTGATGTAGAAAGTAACATCAATATTTCCaa > 1:7454118/1‑36 (MQ=255) tAATCTTGATGTAGAAAGTAACATCAATATTTCCAATaa > 1:7126412/1‑39 (MQ=255) tAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAg > 1:5418712/1‑71 (MQ=255) tAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAg > 1:5352605/1‑71 (MQ=255) aTCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGt < 1:1374637/53‑1 (MQ=255) cTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGt < 1:4574152/69‑1 (MQ=255) TTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTaa < 1:7583342‑M1/70‑1 (MQ=255) tgatgttactttctacatcaaTATTTCCAATAACTCCCGCGTTGCAGGTa > 1:1571745‑M2/22‑50 (MQ=255) tgatgttactttctacatcaaTATTTCCAATAACTCCCGCGTTGCAGGTa > 1:119502‑M2/22‑50 (MQ=255) tgatgttactttctacatcaaTATTTCCAATAACTCCCGCGTTGCAGGTa > 1:5640653‑M2/22‑50 (MQ=255) TGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATa < 1:7023626‑M1/71‑1 (MQ=255) TGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCCcaagtat < 1:4988795‑M1/68‑4 (MQ=255) TGATCTAGAAAGAAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTAt < 1:2663749‑M1/51‑1 (MQ=255) GATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTaa > 1:7062458‑M1/1‑68 (MQ=255) ATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACt > 1:1734769‑M1/1‑71 (MQ=255) TGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACtt > 1:5873565‑M1/1‑71 (MQ=255) TGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACtt > 1:287329‑M1/1‑71 (MQ=255) TGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATT‑CATTAtctc > 1:1282383‑M1/1‑58 (MQ=255) ttgAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTAc < 1:7368942/69‑1 (MQ=255) TAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTAc > 1:2102105‑M1/1‑71 (MQ=255) gAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACaa > 1:3286714/1‑71 (MQ=255) gAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACaa < 1:1075641/71‑1 (MQ=255) aaaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACt < 1:2119142/65‑1 (MQ=255) aaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACg < 1:5424686/71‑1 (MQ=255) aaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACg < 1:7907576/71‑1 (MQ=255) gTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACtt < 1:2997344/63‑1 (MQ=255) gTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGaa < 1:38720/71‑1 (MQ=255) gTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGa > 1:5124853/1‑70 (MQ=255) acatcaaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAAcc > 1:257248‑M2/8‑71 (MQ=255) caaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTaca > 1:605617‑M2/4‑71 (MQ=255) caaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTaca > 1:6566393‑M2/4‑71 (MQ=255) aTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTacac > 1:4002604‑M2/2‑70 (MQ=255) aTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTacac > 1:7384996‑M2/2‑70 (MQ=255) | CACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACAC > AP009048/390027‑390163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |