| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3663743 | 82 (1.010) | 5 (0.070) | 3/92 | NT | 6.6% | coding (417/1068 nt) | rffG | dTDP‑glucose 4,6‑dehydratase |
| ? | AP009048 | = 3663770 | 65 (0.850) | coding (390/1068 nt) | rffG | dTDP‑glucose 4,6‑dehydratase | |||||
Only 100 of 106 total aligned reads displayed.
ACGGCGTGGTTTCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGCGCCGCTTCAAGCAATG > AP009048/3663700‑3663840 | aCGGCGTGGTTTCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATatga > 1:5776641/1‑71 (MQ=255) cGGCGTGGTTTCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATatga < 1:419554/70‑1 (MQ=255) cGTGGTTTCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGaa < 1:1828584/71‑1 (MQ=255) gTGGTTTCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGaa > 1:2703547/1‑70 (MQ=255) tGGTTTCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGaaaa < 1:2787453/71‑1 (MQ=255) ggTTTCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAAc > 1:3414735/1‑71 (MQ=255) ggTTTCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAAc > 1:1481407/1‑71 (MQ=255) tttCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACg > 1:7183958/1‑70 (MQ=255) tCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGaa > 1:5086125/1‑71 (MQ=255) tGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCt > 1:5068618/1‑71 (MQ=255) gaagaaATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCt > 1:7889942/1‑70 (MQ=255) aagaaATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTg < 1:3046859/70‑1 (MQ=255) agaaATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAt > 1:6867711/1‑71 (MQ=255) gaaATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGaa < 1:2546585/56‑1 (MQ=255) aaTCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAtttt > 1:5979944/1‑71 (MQ=255) aaTCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAtttt < 1:4224270/71‑1 (MQ=255) aaTCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAtttt < 1:463373/71‑1 (MQ=255) aaTCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAtttt > 1:148136/1‑71 (MQ=255) atcatcCGTCGAGTGCAGGTCACCATATACTTTGTCAGTGGAGATATGATGaaa < 1:3839611/54‑1 (MQ=255) catcCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTa > 1:5425776/1‑71 (MQ=255) atcCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGAtg > 1:6234928‑M2/1‑46 (MQ=255) gTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTa > 1:7468841/1‑66 (MQ=255) gTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTc > 1:6630679/1‑71 (MQ=255) tCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATatga < 1:5925035/41‑1 (MQ=255) tCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATatga < 1:476983/41‑1 (MQ=255) tCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATatga < 1:1924218/41‑1 (MQ=255) tCGAGTGCACGTCACCATATACTTCGTCAGTGGAGATatga < 1:7815253/41‑1 (MQ=255) gTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCa < 1:52036/71‑1 (MQ=255) gTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCa < 1:2774669/71‑1 (MQ=255) tGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAttttt > 1:1590551/1‑58 (MQ=255) tGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAg > 1:6822538/1‑71 (MQ=255) tGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAg > 1:863462/1‑71 (MQ=255) gCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgc > 1:4919098/1‑71 (MQ=255) cAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACgg < 1:794756/43‑1 (MQ=255) cAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgcg > 1:1013097/1‑71 (MQ=255) cAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgcg > 1:4664375/1‑71 (MQ=255) cAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgc > 1:5090612/1‑70 (MQ=255) aaGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgcg > 1:7388733/2‑71 (MQ=255) aGGTCACCATATACTTCGTCAGTGGAGATATGATGaaa < 1:7528617/38‑1 (MQ=255) aGGTCACCATATACTTCGTCAGTGGAGATATGATGaaa < 1:1688252/38‑1 (MQ=255) aGGTCACCATATACTTCGTCAGTGGAGATATGATGaaa < 1:6514518/38‑1 (MQ=255) aGGTCACCATATACTTCGTCAGTGGAGATATGATGaaa < 1:6172826/38‑1 (MQ=255) ggTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCa < 1:3330234/71‑1 (MQ=255) gTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAttt < 1:146076/51‑1 (MQ=255) gTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATc < 1:4054436/57‑1 (MQ=255) gTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATc < 1:283240/57‑1 (MQ=255) gTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTc > 1:2051741/1‑64 (MQ=255) cACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAtttttt > 1:3103843/1‑52 (MQ=255) aCCATATACTTCGTCAGTGGAGATATGAtgacctgcactcgacggatgatttcttcaccgaaaccacgccg < 1:3490744‑M2/71‑44 (MQ=255) ccATATACTTCGTCAGTGGAGATATGATGAAAACgg < 1:236853/36‑1 (MQ=255) cATATACTTCGTCAGTGGAGATATGAtgacctgcactcgacggatg > 1:2846668‑M2/1‑26 (MQ=255) cATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAttttt < 1:5100413/48‑1 (MQ=255) cATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTc < 1:6672616/59‑1 (MQ=255) atatACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAg > 1:4908552/1‑70 (MQ=255) tataCTTCGTCAGTGGAGATATGAtgacctgcactcgacggatgatttcttcaccgaaaccacgccgtatg < 1:7472969‑M2/71‑48 (MQ=255) tataCTTCGTCAGTGGAGATATGAtgacctgcactcgacggatgat < 1:5553204‑M2/46‑23 (MQ=255) tataCTTCGTCAGTGGAGATATGAtgacctgcactcgacggatgat < 1:842082‑M2/46‑23 (MQ=255) tataCTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAttttt < 1:6766481/46‑1 (MQ=255) tataCTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTc > 1:7244051/1‑66 (MQ=255) tataCTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTc > 1:3265382/1‑66 (MQ=255) ataCTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAtttttt < 1:3437745/46‑1 (MQ=255) ataCTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGAt < 1:4294991/41‑1 (MQ=255) ataCTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCa < 1:1711043/57‑1 (MQ=255) ataCTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgc < 1:2249833/59‑1 (MQ=255) ataCTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgc < 1:4217496/59‑1 (MQ=255) taCTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTAt > 1:1346946/1‑47 (MQ=255) taCTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAg > 1:2883416/1‑71 (MQ=255) ttCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAg > 1:6493206/1‑54 (MQ=255) ttCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAg > 1:6703150/1‑54 (MQ=255) cGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGccc < 1:5589006/69‑1 (MQ=255) cGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCcgc > 1:5254835/1‑71 (MQ=255) gTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCcgc > 1:6047815/1‑70 (MQ=255) gTCAGTGGAGATATGATGAAAACGGAACGATGATTTTTTATCTTCCGTCAGCGCa > 1:5325182/1‑55 (MQ=255) tCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCcgcg > 1:5328443/1‑70 (MQ=255) aGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGcgccg < 1:4367498/71‑1 (MQ=255) gTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgcgc > 1:4510566/1‑50 (MQ=255) gTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgcgc > 1:1422028/1‑50 (MQ=255) gTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgcgc > 1:6891422/1‑50 (MQ=255) gTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgcgc > 1:6882283/1‑50 (MQ=255) gTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAgcgc > 1:3301053/1‑50 (MQ=255) gTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGcgccgc > 1:4143498/1‑71 (MQ=255) ggAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGCGCCGCtt > 1:4203034/1‑71 (MQ=255) gagaTATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAg > 1:7401047/1‑44 (MQ=255) gagaTATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGCGCCGCtt > 1:6367390/1‑70 (MQ=255) tatGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCAt < 1:1078254/45‑1 (MQ=255) tatGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCAt < 1:7175463/45‑1 (MQ=255) tatGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGCGCCGCTTCAAGc < 1:6965810/71‑1 (MQ=255) atgatgAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTaa > 1:802681/1‑52 (MQ=255) atgatgAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTaa > 1:7051960/1‑52 (MQ=255) atgatgAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGCGCCGCTTCAAGc > 1:6386657/1‑70 (MQ=255) tgatgaACACGGAACGCTGATTTTTTATCTTCCGTCAgcgc < 1:3891443/41‑1 (MQ=255) tgatgaAAACGGAACGCTGATTTTTTATCTTCCGTCAgcgc < 1:153825/41‑1 (MQ=255) tgatgaAAACGGAACGCTGATTTTTTATCTTCCGTCAgcgc < 1:855348/41‑1 (MQ=255) tgatgaAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGCGCCGCTTCAAGCaa > 1:5336396/1‑71 (MQ=255) gatgaAAACGGAACGCTGATTTTTTATCTTCCGTCa < 1:4856198/36‑1 (MQ=255) atgaAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCcg > 1:4539515/1‑54 (MQ=255) atgaAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCcg > 1:5422820/1‑54 (MQ=255) atgaAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCcg > 1:5597461/1‑54 (MQ=255) atgaAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGCGCCGCTTCAAGCAATg > 1:7471775/1‑71 (MQ=255) atgaAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGCGCCGCTTCAAGCAATg > 1:6812536/1‑71 (MQ=255) | ACGGCGTGGTTTCGGTGAAGAAATCATCCGTCGAGTGCAGGTCACCATATACTTCGTCAGTGGAGATATGATGAAAACGGAACGCTGATTTTTTATCTTCCGTCAGCGCATTCCAGTAAGCCCGCGCCGCTTCAAGCAATG > AP009048/3663700‑3663840 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |