| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 45412 = | 57 (0.930) | 7 (0.120) +AC |
3/94 | NT | 8.3% | coding (489/531 nt) | kefF | flavoprotein subunit for the KefC potassium efflux system |
| ? | Exported | = 2082513 | 104 (1.690) | coding (660/777 nt) | exuR | DNA‑binding transcriptional repressor | |||||
CATTCCAGCAGACGTTGCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/45432‑45412‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTCCAGATGCTGCCACATTGCCAGCTTAGCAGCATGAGGATCTTTGC < Exported/2082513‑2082464 || aATTCCAGCAGACGTTGCTTAACGTTTTCCAGATGCTGCCACATTGCCAGCTTCGCCGCTCGGGCATCTTT < 1:1263639/70‑1aATTCCAGCAGACGTTGCTTAACGTTTTCCAGATGCTGCCACATTGCCAGCTTCGCCGCTCGGGCATCTTT > 1:4136953/2‑71 TTCCAGCAGACGTTGCTTATCGTTTTCCAGATGCTGCCACA < 1:4192985/41‑1 TTCCAGCAGACGTTGCTTAACGTTTTCCAGATGCTGCCACATTGCCAGCTTCGCCGCTCGGGCATCTTTtt < 1:3555868/71‑3 TTCCAGCAGACGTTGCTTAACGTTTTCCAGATGCTGCCACATTGCCAGCTTCGCCGCTCGGGCATCTTTtt < 1:5359282/71‑3 TTCCAGCAGACGTTGCTTAACGTTTTCCAGATGCTGCCACA < 1:2113237/41‑1 CCAGCAGACGTTGCTTAACGTTTTCCAGATGCTGCCACATT > 1:4650531/1‑41 || CATTCCAGCAGACGTTGCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/45432‑45412‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTCCAGATGCTGCCACATTGCCAGCTTAGCAGCATGAGGATCTTTGC < Exported/2082513‑2082464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |