New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Exported	183922 =	60 (0.980)	8 (0.160) +TTATAACA	4/82	NT	16.8%	intergenic (+8/‑29)	rnhB/dnaE	ribonuclease HII, degrades RNA of DNA‑RNA hybrids/DNA polymerase III alpha subunit
	?	Exported	= 296824	35 (0.570)					intergenic (+125/‑28)	cof/ybaO	thiamin pyrimidine pyrophosphate hydrolase/predicted DNA‑binding transcriptional regulator

TCTTCAGATTCCGGTTTACTTAATCTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/183951‑183922 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTAATTTTATTTTA  <  Exported/296824‑296809                               ||||||||                 TCTTCAGATTCCGGTTTACTTAATCTCGACTTATAACATTT               <  1:2527796/41‑1     CAGATTCCGGTTTACTTAATCTCGACTTATAACATTTTAATTTTATTTT   >  1:5477462/1‑49       GATTCCGGTTTACTTAATCTCGACTTATAACATTTTAATTTTATTT    <  1:4490896/46‑1        ATTCCGGTTTACTTAATCTCGACTTATAACATTTTAATTTTATTTTc  <  1:2783040/47‑2         TTCCGGTTTACTTAATCTCGACTTATAACATTTTAATTTTATTTTc  >  1:1518840/1‑45         TTCCGGTTTACTTAATCTCGACTTATAACATTTTAATTTTATTTTc  >  1:5075803/1‑45          TCCGGTTTACTTAATCTCGACTTATAACATTTTAATTTTATT     <  1:285945/42‑1            CGGTTTACTTAATCTCGACTTATAACATTTTAATTTTATTTT   >  1:2381897/1‑42                 TACTTAATCTCGACTTATAACATTTTAATTTTATT     <  1:1257799/35‑1                               ||||||||                 TCTTCAGATTCCGGTTTACTTAATCTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/183951‑183922 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTAATTTTATTTTA  <  Exported/296824‑296809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.