| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 826008 | 47 (0.770) | 13 (0.280) +ACGGCTACATCA |
4/74 | NT | 26.3% | coding (405/1254 nt) | ychP | predicted invasin |
| ? | Exported | 1727040 = | 50 (0.810) | coding (1190/3888 nt) | purL | phosphoribosylformyl‑glycineamide synthetase | |||||
TGTGGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCA > Exported/825939‑826077 | tgtgGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGc < 1:447048/71‑1 (MQ=255) tgGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTg < 1:1070382/71‑1 (MQ=255) cGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACg < 1:1781422/71‑1 (MQ=255) gTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGa < 1:3533500/71‑1 (MQ=255) tggCAACGCTGGGCGCGCGGGAACTGGCTGGGGGGTTATAACACTTTTTATGACAACTTGCTgg < 1:3846865/63‑1 (MQ=255) gggCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGaaaa > 1:1477072/1‑71 (MQ=255) ggCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTg < 1:2725317/62‑1 (MQ=255) ggCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAAt > 1:1273061/1‑71 (MQ=255) gCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTg > 1:2780436/1‑61 (MQ=255) aaCGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCtt > 1:154469/1‑71 (MQ=255) cGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCa < 1:3481891/71‑1 (MQ=255) cGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCa < 1:2195274/71‑1 (MQ=255) gCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCtt > 1:4748585/1‑68 (MQ=255) gCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCt > 1:159054/1‑67 (MQ=255) gCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCt > 1:4152702/1‑67 (MQ=255) gCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCt > 1:1643075/1‑67 (MQ=255) gCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCt > 1:4850166/1‑67 (MQ=255) gcgcgGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCgg < 1:288286/71‑1 (MQ=255) cgGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCt < 1:3831841/71‑1 (MQ=255) ggCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGaaa < 1:2340183/52‑1 (MQ=255) gCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCttt < 1:4397083/71‑1 (MQ=255) gCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCttt < 1:4052650/71‑1 (MQ=255) gCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCttt < 1:4102932/71‑1 (MQ=255) gCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCttt < 1:4665668/71‑1 (MQ=255) tggctggTGGGTTATAATACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCttt < 1:3234403/66‑1 (MQ=255) ggctggTGGGTTATAACACTTTTTATGACAACTTGCTGGa > 1:4612954/1‑40 (MQ=255) gctggTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTg > 1:1852900/1‑65 (MQ=255) gctggTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTg > 1:4795274/1‑65 (MQ=255) ctggTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGa < 1:4986516/71‑1 (MQ=255) tggGTTATAACACTTTTTATGACAACTTGCTGGACGAAAAt > 1:4073204/1‑41 (MQ=255) tggGTTATAACACTTTTTATGACAACTTGCTGGACGAAAAt > 1:4066649/1‑41 (MQ=255) gTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCagcgag < 1:3761247/48‑1 (MQ=255) gTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGa < 1:3116333/64‑1 (MQ=255) ataACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGc > 1:5124839/1‑71 (MQ=255) ataACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGc > 1:5131617/1‑71 (MQ=255) aaCACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGc > 1:933316/1‑69 (MQ=255) aaCACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCg > 1:897373/1‑70 (MQ=255) cacTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTgg > 1:4619868/1‑64 (MQ=255) tttttATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCttt < 1:3550938/46‑1 (MQ=255) ttttATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTg > 1:1780278/1‑59 (MQ=255) ttttATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATAttt > 1:239619/1‑71 (MQ=255) ctttaTGACAACTTGacggctacatcattcactttttctt < 1:912676‑M1/39‑26 (MQ=255) ctttaTGACAACTTGacggctacatcattcactttttctt < 1:3123572‑M1/39‑26 (MQ=255) ctttaTGACAACTTGacggctacatcattcactttttctt < 1:16722‑M1/39‑26 (MQ=255) tttATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTgg > 1:524304/1‑46 (MQ=255) tttATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTgg > 1:2242098/1‑46 (MQ=255) tttATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTgg > 1:484659/1‑59 (MQ=255) ttATGACAACTTGacggctacatcattcactttttcttc < 1:1151427‑M1/39‑27 (MQ=255) ttATGACAACTTGacggctacatcattcactttttctt < 1:4707470‑M1/38‑26 (MQ=255) tATGACAACTTGacggctacatcattcactttttcttcacaa > 1:1529032‑M1/1‑12 (MQ=255) tATGACAACTTGacggctacatcattcactttttctt > 1:1422022‑M1/1‑12 (MQ=255) aTGACAACTTGacggctacatcattcactttttcttcacaa > 1:2838818‑M1/1‑11 (MQ=255) aTGACAACTTGacggctacatcattcactttttcttcacaa > 1:1931904‑M1/1‑11 (MQ=255) tGACAACTTGacggctacatcattcactttttcttcac < 1:2463354‑M1/38‑29 (MQ=255) tGACAACTTGacggctacatcattcactttttctt < 1:4611002‑M1/35‑26 (MQ=255) tGACAACTTGacggctacatcattcactttttctt < 1:122654‑M1/35‑26 (MQ=255) tGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGAt < 1:2947551/71‑1 (MQ=255) gACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGa < 1:2245232/69‑1 (MQ=255) aCAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGc > 1:2063939/1‑49 (MQ=255) aCAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGAtt < 1:1404439/70‑1 (MQ=255) aCAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGAtt < 1:1042786/70‑1 (MQ=255) aCAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTa < 1:1047460/71‑1 (MQ=255) cAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGAtt < 1:3795403/69‑1 (MQ=255) cAAATTGacggctacatcattcactttttcttcac > 1:5212061‑M1/1‑7 (MQ=255) aaCTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGTGGCGAATATTTGCGATTATc > 1:4439205/1‑71 (MQ=255) aaCTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATc < 1:2384773/71‑1 (MQ=255) cTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGc < 1:2451866/62‑1 (MQ=255) tGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGc > 1:5175786/1‑70 (MQ=255) gCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTTTCGGCa < 1:44883/70‑1 (MQ=255) | TGTGGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCA > Exported/825939‑826077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |