| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1036921 | 80 (1.300) | 12 (0.230) +GTTTGCC |
4/84 | NT | 15.5% | coding (89/1059 nt) | rsxD | predicted inner membrane oxidoreductase |
| ? | Exported | 2889317 = | 73 (1.190) | intergenic (‑60/+263) | ytfL/msrA | predicted inner membrane protein/methionine sulfoxide reductase A | |||||
Only 100 of 111 total aligned reads displayed.
GCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCATCGGTT > Exported/1036852‑1036988 | gctCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGcc < 1:1489575/70‑1 (MQ=255) ccTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAAt < 1:1772019/71‑1 (MQ=255) cTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGaa > 1:2838546/1‑69 (MQ=255) cTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGaa > 1:2678016/1‑69 (MQ=255) taCCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCg < 1:1363671/68‑1 (MQ=255) taCCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAg < 1:3267009/71‑1 (MQ=255) taCCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAg < 1:4800130/71‑1 (MQ=255) aCCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAgc > 1:477417/1‑71 (MQ=255) cccATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAgc < 1:4615925/70‑1 (MQ=255) cATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAgcgc > 1:870967/1‑70 (MQ=255) cATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAgcgc > 1:5234443/1‑70 (MQ=255) cATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCa < 1:2852301/71‑1 (MQ=255) aTAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCaa < 1:3368504/71‑1 (MQ=255) aTAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCaa < 1:1019901/71‑1 (MQ=255) aTAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCaa < 1:2037839/71‑1 (MQ=255) aTAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCaa > 1:961698/1‑71 (MQ=255) tAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTTCCAGGAATCGc < 1:4354260/63‑1 (MQ=255) tAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAAt > 1:2359107/1‑60 (MQ=255) tAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGc < 1:4024904/63‑1 (MQ=255) tAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAAc > 1:1540604/1‑71 (MQ=255) aaacAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACt > 1:61651/4‑71 (MQ=255) aaCCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACt > 1:2961307/1‑71 (MQ=255) aaCCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACt > 1:1337783/1‑71 (MQ=255) aCCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCTAGGAATCGCAGCGCAACt > 1:4335697/1‑70 (MQ=255) aCCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAgg > 1:2047406/1‑55 (MQ=255) aCCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAg > 1:701602/1‑54 (MQ=255) aCCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGa > 1:5127305/1‑56 (MQ=255) aCCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACtg < 1:3781144/71‑1 (MQ=255) aCCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACtg > 1:189542/1‑71 (MQ=255) aCCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACtg > 1:4161347/1‑71 (MQ=255) ccAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATc < 1:2675933/58‑1 (MQ=255) ccAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCa > 1:5667701/1‑61 (MQ=255) gcCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAgg < 1:5571735/49‑1 (MQ=255) gcCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGttt > 1:5472455/1‑71 (MQ=255) ccAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGaa < 1:4915510/50‑1 (MQ=255) ccAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtt < 1:1912598/69‑1 (MQ=255) aGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttttt < 1:2370063/71‑1 (MQ=255) aGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttttt < 1:3961225/71‑1 (MQ=255) aGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttttt < 1:2086494/71‑1 (MQ=255) aGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttttt < 1:3002321/71‑1 (MQ=255) gACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTttg < 1:4893702/71‑1 (MQ=255) cATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAg < 1:5171747/42‑1 (MQ=255) cATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTttggt < 1:5177379/71‑1 (MQ=255) cATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTttggt < 1:4123392/71‑1 (MQ=255) gcgcATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGttttt > 1:4407964/1‑63 (MQ=255) gcgcATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGttttt > 1:1394471/1‑63 (MQ=255) cgcATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTttggt < 1:2497912/66‑1 (MQ=255) aTGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCaa > 1:5158545/1‑45 (MQ=255) aTGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCaa > 1:449340/1‑45 (MQ=255) aTGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCaa > 1:380299/1‑45 (MQ=255) aTGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTttg > 1:906235/1‑58 (MQ=255) aTGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTActct > 1:2385058/1‑71 (MQ=255) aTGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTActc < 1:2946173/70‑1 (MQ=255) aTGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTActc > 1:4823916/1‑70 (MQ=255) gCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTttggttg < 1:466619/60‑1 (MQ=255) cTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttt > 1:3587581/1‑52 (MQ=255) cTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttt > 1:904874/1‑52 (MQ=255) cTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttt > 1:143509/1‑52 (MQ=255) cTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCg < 1:3341867/70‑1 (MQ=255) ttGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttttt < 1:1857353/51‑1 (MQ=255) ttGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGtt < 1:3644329/69‑1 (MQ=255) tGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttt > 1:3013343/1‑48 (MQ=255) tGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttt > 1:2024024/1‑48 (MQ=255) tGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtttt > 1:130791/1‑48 (MQ=255) gtgtTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGtt > 1:4007974/1‑66 (MQ=255) gtTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGtt < 1:1056520/42‑1 (MQ=255) attgCTCGCAGGCGTGCCgtttgccatacacattgaaagacgatc < 1:83254‑M1/44‑28 (MQ=255) attgCTCGCAGGCGTGCCgtttgccatacacattgaaagacgatc < 1:1634870‑M1/44‑28 (MQ=255) ttGCTCGCAGGCGTGCCttttgccatacacattgaaagacga < 1:1091202‑M1/42‑26 (MQ=255) ttGCTCGCAGGCGTGCCgtttgccatacacattgaaagacga < 1:802490‑M1/42‑26 (MQ=255) ttGCTCGCAGGCGTGCCgtttgccatacacattgaaaga > 1:1614225‑M1/1‑17 (MQ=255) ttGCTCGCAGGCGTGCCgtttgccatacacattgaaaga > 1:82173‑M1/1‑17 (MQ=255) ttGCTCGCAGGCGTGCCgtttgccatacacattgaaaga > 1:3475854‑M1/1‑17 (MQ=255) ttGCTCGCAGGCGTGCCgtttgccatacacattgaaag > 1:2396428‑M1/1‑17 (MQ=255) tGCTCGCAGGCGTGCCgtttgccatacacattgaaagacgatc > 1:4957110‑M1/1‑16 (MQ=255) tGCTCGCAGGCGTGCCgtttgccatacacattgaaa < 1:610549‑M1/36‑21 (MQ=255) tGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTg > 1:410635/1‑71 (MQ=255) tGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTg > 1:1638132/1‑71 (MQ=255) gCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCg > 1:934218/1‑59 (MQ=255) tCGCAGGCGTGCCgtttgccatacacattgaaagacgat < 1:622591‑M1/39‑27 (MQ=255) tCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTg < 1:1829806/68‑1 (MQ=255) cGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTgg > 1:845769/1‑71 (MQ=255) cGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTg > 1:1208721/1‑70 (MQ=255) gCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGc < 1:2490813/71‑1 (MQ=255) cggCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGa > 1:2412435/3‑60 (MQ=255) cAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTg > 1:2338333/1‑68 (MQ=255) cAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCa < 1:1120512/71‑1 (MQ=255) cAGCCGTGCCAGGAATCGCAGCGCAACTGTGGGTTTTTGGTTGGGGTACTCTCGTTCAGAACCTGTTg > 1:1605485/1‑68 (MQ=255) aGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTc > 1:1452164/1‑56 (MQ=255) aGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCAt < 1:5479527/71‑1 (MQ=255) gCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCATc < 1:4295419/71‑1 (MQ=255) ccGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCATCg < 1:4871551/71‑1 (MQ=255) gTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTa < 1:2531843/43‑1 (MQ=255) gTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATcc < 1:4565466/58‑1 (MQ=255) gTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATcc < 1:2636593/58‑1 (MQ=255) gTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCATCGGt < 1:5046390/71‑1 (MQ=255) gTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCATCGGt < 1:1526244/71‑1 (MQ=255) tGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCATCGGtt < 1:1077985/71‑1 (MQ=255) tGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCATCGGtt < 1:3838729/71‑1 (MQ=255) gCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTg > 1:4616231/1‑58 (MQ=255) | GCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCATCGGTT > Exported/1036852‑1036988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |