| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 1153172 | 27 (0.540) | 3 (0.060) | 3/98 | NT | 9.2% | intergenic (+191/‑20) | fabG/acpP | 3‑oxoacyl‑[acyl‑carrier‑protein] reductase/acyl carrier protein |
| ? | AP009048 | = 1153204 | 33 (0.690) | coding (13/237 nt) | acpP | acyl carrier protein | |||||
ACCTGCCGGGATTTAGTTGCAAATTTTTCAACATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGAAAATTATCGGCGAACAGCTGGGC > AP009048/1153103‑1153242 | aCCTGCCGGGATTTAGTTGCAAATTTTTCAACATTTTATACACTACGAAAACCATCGCGAAAGCGAGtttt > 1:3136986/1‑71 (MQ=255) cTGCCGGGATTTAGTTGCAAATTTTTCAACATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGa < 1:4131851/71‑1 (MQ=255) cTGCCGGGATTTAGTTGCAAATTTTTCAACATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGa > 1:1704918/1‑71 (MQ=255) aTTTAGTTGCAAATTTTTCAACATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGaaa < 1:127550/70‑1 (MQ=255) aTTTAGTTGCAAATTTTTCAACATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAAt < 1:254870/71‑1 (MQ=255) tAGTTGCAAATTTTTCAACATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAAttt < 1:204675/70‑1 (MQ=255) cAAATTTTTCAACATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTa < 1:3837894/71‑1 (MQ=255) aTTTTTCAACATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTAt > 1:839717/1‑69 (MQ=255) cATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTcgatagtgctcatactcttaaatttcctatca < 1:3675644‑M1/71‑33 (MQ=255) cATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCg < 1:1171776/71‑1 (MQ=255) aTTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTcgatagtgctcatactcttaaatttcctatcaa < 1:2564371‑M1/71‑34 (MQ=255) aTTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTaa > 1:318448/1‑53 (MQ=255) aTTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAaga > 1:1387684/1‑55 (MQ=255) acacTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTaa > 1:2679690/1‑46 (MQ=255) acTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGt > 1:92563/1‑71 (MQ=255) acTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGt > 1:3338004/1‑71 (MQ=255) tACGAAAACCAT‑‑CGAAAGCGAGTTTTGATAGGAAATTTAagag < 1:2755798/43‑1 (MQ=37) cGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAagag > 1:3968793/1‑43 (MQ=255) cGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCTTTa < 1:2301986/69‑1 (MQ=255) cGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTaa < 1:2446324/70‑1 (MQ=255) aaCCATCGCGAAAGCGAGTTTTGATAGTAAATTTAAGAGTATGAGCACTATCg < 1:4250059/53‑1 (MQ=255) aCCATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGAAAAt > 1:3558886/1‑71 (MQ=255) ccATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATc < 1:3777093/50‑1 (MQ=255) ccATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGAAAAtt < 1:4575679/71‑1 (MQ=255) cATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGAAAATTa > 1:335954/1‑71 (MQ=255) aTCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGa > 1:1191296‑M2/1‑49 (MQ=255) tCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCgaag < 1:3396439/51‑1 (MQ=255) cgcgAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGAAAATTATCg > 1:3648154/1‑71 (MQ=255) gcgAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGaaa > 1:3379518/1‑63 (MQ=255) gAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGaa < 1:1162776‑M2/46‑3 (MQ=255) gAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGAAAATTATCGGc > 1:3495983/1‑70 (MQ=255) gAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGAAAATTATCGGCg < 1:3482255/71‑1 (MQ=255) aaaGCGAGTTTcgatagtgctcatactcttaaatttcctatcaaaa > 1:3912836‑M1/1‑11 (MQ=255) gCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACt < 1:2610796/36‑1 (MQ=255) gCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGAAAATTATCGGCGAACa < 1:2645542/71‑1 (MQ=255) ttttGATAGGAAATTTAAGAGTATGAGCACTATCGaaactcgcttt > 1:3912836‑M2/1‑35 (MQ=255) ttttGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGa < 1:2234316/50‑1 (MQ=255) ttcgatagtgctcatactcttaaatttcctatcaaaactcgctttc < 1:1162776‑M1/46‑45 (MQ=255) ttGATAGGAAATTTAAGAGTATGAGCACTATCGaaactcgctttcgcgatggttttcgtagtgtataaaat < 1:2564371‑M2/71‑39 (MQ=255) tcgatagtgctcatactcttaaatttcctatcaaaactcgctttcgcgat > 1:1191296‑M1/1‑1 (MQ=255) | ACCTGCCGGGATTTAGTTGCAAATTTTTCAACATTTTATACACTACGAAAACCATCGCGAAAGCGAGTTTTGATAGGAAATTTAAGAGTATGAGCACTATCGAAGAACGCGTTAAGAAAATTATCGGCGAACAGCTGGGC > AP009048/1153103‑1153242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |