| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 1481996 = | 31 (0.620) | 11 (0.230) +AT |
10/98 | NT | 38.2% | coding (1145/1758 nt) | ynbC | predicted hydrolase |
| ? | AP009048 | 2564137 = | 6 (0.120) | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
AATCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGCCAA > AP009048/1481926‑1482065 | ttggtacgcctctttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatg > 1:1381808‑M1/71‑71 (MQ=255)aaTCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGgcg < 1:3493380/71‑1 (MQ=255)aaTCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGgcg < 1:3428404/71‑1 (MQ=255)aaTCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGgcg > 1:1779506/1‑71 (MQ=255) aTCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGgcgc < 1:2142163/71‑1 (MQ=255) tCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGcgcg < 1:3232825/71‑1 (MQ=255) gCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTAtt > 1:1351805/1‑70 (MQ=255) cAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCg > 1:2691370/1‑71 (MQ=255) tctttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatGCGGTAt > 1:2624918‑M1/61‑67 (MQ=255) aaGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGc < 1:867084/71‑1 (MQ=255) ctttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatGCGGTATTCGc < 1:1036551‑M1/11‑1 (MQ=255) tttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatGCGGTATTCg < 1:2329770‑M1/10‑1 (MQ=255) tttttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatGCGGTATTCGc > 1:1437388‑M1/59‑69 (MQ=255) ggTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCa < 1:1146162/71‑1 (MQ=255) gtagtaACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCa < 1:1493664/70‑1 (MQ=255) tttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatGCGGTATTCGCCa < 1:111552‑M1/13‑1 (MQ=255) tttggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatG‑GGTATTCGCCAgcg < 1:1922043‑M1/15‑1 (MQ=255) tggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatGCGGTATTCGCCagcgg < 1:374665‑M1/17‑2 (MQ=255) tggcggatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatGCGGTATTCGCCAgc > 1:731145‑M1/55‑69 (MQ=255) taACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCa < 1:3836743/71‑1 (MQ=255) aCGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCaa > 1:261455/1‑70 (MQ=255) aCGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCaa < 1:176947/70‑1 (MQ=255) aCGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCa > 1:3272314/1‑69 (MQ=255) gatcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatg > 1:1278684‑M1/50‑50 (MQ=255) gatcggttgtgccggtgacagtgaaatcactcgcatttccttcctgaatGc > 1:173415‑M1/50‑51 (MQ=255) atcggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatGCGGTATTCGCCAgcg > 1:800707‑M1/49‑64 (MQ=255) ggttgtgccggtgacggtgaaatcactcgcatttccttcctgaatg > 1:2798614‑M1/46‑46 (MQ=255) cGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACa < 1:2110429/71‑1 (MQ=255) tAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTAt > 1:4289814/1‑43 (MQ=255) tAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACaa > 1:1244425/1‑68 (MQ=255) tAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATa > 1:4048808/1‑71 (MQ=255) tCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCa < 1:4268719/51‑1 (MQ=255) gACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATa < 1:3632004/66‑1 (MQ=255) aaaaTCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTa > 1:3276675/1‑70 (MQ=255) gaaatcactcgcatttccttcctgaatGCGGTATTCGCCAgcg < 1:4066566‑M1/16‑1 (MQ=255) aaatcactcgcatttccttcctgaatGCGGTATTCGCCAg > 1:3429793‑M1/27‑40 (MQ=255) aaTCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTaaa > 1:112234/1‑70 (MQ=255) tACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAAt < 1:3164429/56‑1 (MQ=255) aCCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATa > 1:3036412/1‑56 (MQ=255) aCCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTaa < 1:477480/64‑1 (MQ=255) ccTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCg > 1:764930/1‑71 (MQ=255) ccTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCg < 1:1826230/71‑1 (MQ=255) aCAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTg < 1:2522088/69‑1 (MQ=255) cAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGcc > 1:4474995/1‑70 (MQ=255) cAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCg < 1:2418039/71‑1 (MQ=255) gtgtTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGAt < 1:2764200/71‑1 (MQ=255) ttGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGAtctc < 1:3428048/71‑1 (MQ=255) ttGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGAtctc < 1:4007843/71‑1 (MQ=255) ttGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGAtctc < 1:2688801/71‑1 (MQ=255) ttGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGAtctc > 1:2275987/1‑71 (MQ=255) ttGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGAtct < 1:2995816/70‑1 (MQ=255) tggcGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGc > 1:3830114/1‑71 (MQ=255) gcgcGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGcc > 1:307691/1‑70 (MQ=255) gcgcGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGc > 1:4563912/1‑69 (MQ=255) gcgcGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGc > 1:537709/1‑69 (MQ=255) gcgcGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGCCa < 1:2564395/71‑1 (MQ=255) cgcgGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGCCaa < 1:2838478/71‑1 (MQ=255) | AATCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGCCAA > AP009048/1481926‑1482065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |