New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 1334516 = | 56 (0.910) | 7 (0.110) | 3/100 | NT | 10.0% | coding (313/480 nt) | nudD | GDP‑mannose mannosyl hydrolase |
? | Exported | 1334537 = | 70 (1.140) | coding (292/480 nt) | nudD | GDP‑mannose mannosyl hydrolase |
CACCACTCACTATGTGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1334535‑1334516 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAA > Exported/1334537‑1334586 CACCACTCACTATGTGGTGCAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAA < 1:1929165/70‑1 CACCACTCACTATGTGGTGCAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAA < 1:2768126/70‑1 CACCACTCACTATGTGGTGCAATCCGTGCCAGAGAAGTTATC < 1:1455166/42‑1 CACCACTCACTATGTGGTGCAATCCGTGCCAGAGAAGTTATC < 1:2901521/42‑1 CACCACTCACTATGTGGTGCAATCCGTGCCAGAGAAGTTATC < 1:2902884/42‑1 CCACTCACTATGTGGTGCAATCCGTGCCAGAGAAGTTATCGT > 1:2089449/1‑42 CCACTCACTATGTGGTGCAATCCGTGCCAGAGAAGTTATCGT > 1:3532895/1‑42 CACCACTCACTATGTGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1334535‑1334516 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAA > Exported/1334537‑1334586 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |