| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1334516 = | 56 (0.910) | 7 (0.110) | 3/100 | NT | 10.0% | coding (313/480 nt) | nudD | GDP‑mannose mannosyl hydrolase |
| ? | Exported | 1334537 = | 70 (1.140) | coding (292/480 nt) | nudD | GDP‑mannose mannosyl hydrolase | |||||
CGGCAGTAACAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTATCGG > Exported/1334472‑1334606 | cGGCAGTAACAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATcc < 1:1041246/70‑1 (MQ=255)cGGCAGTAACAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATcc < 1:3012892/70‑1 (MQ=255) aaCAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCa > 1:3654338/1‑69 (MQ=255) aCAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCa > 1:1140692/1‑68 (MQ=255) aCAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCa > 1:3009871/1‑68 (MQ=255) aCAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCa > 1:313409/1‑68 (MQ=255) cAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAgaga < 1:562806/71‑1 (MQ=255) cAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAgaga < 1:3305390/71‑1 (MQ=255) cAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAgaga < 1:1738042/71‑1 (MQ=255) cttcttCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGGCAGAGaa > 1:34511/1‑67 (MQ=255) ttcttcCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTAt > 1:2769485/1‑71 (MQ=255) tcttcCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGaa > 1:3057127/1‑50 (MQ=255) cttcCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTa < 1:3183837/68‑1 (MQ=255) cttcCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCg > 1:303942/1‑71 (MQ=255) cttcCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCg > 1:3774108/1‑71 (MQ=255) cttcCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCg > 1:320401/1‑71 (MQ=255) cttcCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCg > 1:324864/1‑71 (MQ=255) ccGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCa > 1:1808783/1‑71 (MQ=255) cGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGtt < 1:132555/63‑1 (MQ=255) cGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGtt < 1:1310591/63‑1 (MQ=255) gATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATa < 1:1598508/71‑1 (MQ=255) aTACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATaa < 1:3030072/71‑1 (MQ=255) aTACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATaa < 1:1527009/71‑1 (MQ=255) aTACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATaa < 1:226591/71‑1 (MQ=255) aTACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATaa < 1:876324/71‑1 (MQ=255) aTACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATaa < 1:1109013/71‑1 (MQ=255) tACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATaaa < 1:2048680/71‑1 (MQ=255) gAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCagag < 1:125421/49‑1 (MQ=255) aGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGtgctgc < 1:779724/71‑1 (MQ=255) gCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGtgctgc > 1:1500225/1‑70 (MQ=255) gCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGtgctgc > 1:1189192/1‑70 (MQ=255) gAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCa < 1:217909/70‑1 (MQ=255) aaaCCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGac < 1:3117124/71‑1 (MQ=255) aaCCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGaca > 1:3722486/1‑71 (MQ=255) ccGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGaca < 1:2913847/69‑1 (MQ=255) gAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACAcc > 1:406630/1‑69 (MQ=255) gAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACAcc > 1:1428260/1‑69 (MQ=255) gAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACAcc > 1:590276/1‑69 (MQ=255) gAGCACCACATAGTGAGTGGTGAAATCAGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACAcc > 1:3754947/1‑69 (MQ=255) gCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTaa < 1:3030404/71‑1 (MQ=255) gCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTaa < 1:1838361/71‑1 (MQ=255) gCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTaa < 1:1418873/71‑1 (MQ=255) gCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTaa < 1:864672/71‑1 (MQ=255) gCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTaa < 1:1306638/71‑1 (MQ=255) caccactcactatgtggtgcAATCCGTGCCAGAGAAGTTATc < 1:2901521‑M2/22‑1 (MQ=255) caccactcactatgtggtgcAATCCGTGCCAGAGAAGTTATc < 1:2902884‑M2/22‑1 (MQ=255) caccactcactatgtggtgcAATCCGTGCCAGAGAAGTTATc < 1:1455166‑M2/22‑1 (MQ=255) caccactcactatgtggtgcAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTaa < 1:1929165‑M2/50‑1 (MQ=255) caccactcactatgtggtgcAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTaa < 1:2768126‑M2/50‑1 (MQ=255) caccacATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTaaa < 1:843730/71‑1 (MQ=255) caccacATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTaa < 1:1044240/70‑1 (MQ=255) accacATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTaaa < 1:2104067/70‑1 (MQ=255) ccactcactatgtggtgcAATCCGTGCCAGAGAAGTTATCGt > 1:2089449‑M2/19‑42 (MQ=255) ccactcactatgtggtgcAATCCGTGCCAGAGAAGTTATCGt > 1:3532895‑M2/19‑42 (MQ=255) cacaTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTAt < 1:9390/38‑1 (MQ=255) cacaTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACt > 1:3863282/1‑71 (MQ=255) cacaTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACt < 1:2218722/71‑1 (MQ=255) acaTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTg < 1:2345924/71‑1 (MQ=255) caTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATc > 1:711947/1‑37 (MQ=255) caTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATc > 1:1122619/1‑37 (MQ=255) caTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTgg > 1:3545608/1‑71 (MQ=255) caTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTgg > 1:1391041/1‑71 (MQ=255) caTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTgg > 1:2181266/1‑71 (MQ=255) caTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTgg > 1:2699465/1‑71 (MQ=255) aTAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGtgctgc < 1:488442/52‑1 (MQ=255) agtgagtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGtgct < 1:1805087/48‑1 (MQ=255) agtgagtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGtgct < 1:2187782/48‑1 (MQ=255) agtgagtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGtgct < 1:1325790/48‑1 (MQ=255) agtgagtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGtgct < 1:3590573/48‑1 (MQ=255) gtgagtgGTGAAATCCGTGCCCGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCctg < 1:3184147/71‑1 (MQ=255) gagtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGcc < 1:71290/48‑1 (MQ=255) gagtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGcc < 1:2772426/48‑1 (MQ=255) gagtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGcc < 1:18423/48‑1 (MQ=255) gagtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGcc < 1:2154702/48‑1 (MQ=255) agtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATaa < 1:3808841/37‑1 (MQ=255) agtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCctgctg > 1:3804929/1‑71 (MQ=255) agtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCctgct < 1:2048688/70‑1 (MQ=255) agtgGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCctgct < 1:479449/70‑1 (MQ=255) tggtgAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGtt < 1:349980/71‑1 (MQ=255) tggtgAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGt > 1:640654/1‑70 (MQ=255) tgtgAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGcc < 1:1987133/43‑1 (MQ=255) ggtgAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGtt < 1:264717/70‑1 (MQ=255) gtgAAATCCGTGCCAGAGAAGTTATCGTCATaaaa < 1:1762459/35‑1 (MQ=255) gtgAAATCCGTGCCAGAGAAGTTATCGTCATaaaa < 1:1789108/35‑1 (MQ=255) gtgAAATCCGTGCCAGAGAAGTTATCGTCATaaaa < 1:723774/35‑1 (MQ=255) gtgAAATCCGTGCCAGAGAAGTTATCGTCATaaaa < 1:2407410/35‑1 (MQ=255) gtgAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTa < 1:2693366/70‑1 (MQ=255) gtgAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTAt < 1:677063/71‑1 (MQ=255) gAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTATCg > 1:2115004/1‑71 (MQ=255) gAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTATCg > 1:1985852/1‑71 (MQ=255) aaaTCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGa > 1:1068944/1‑43 (MQ=255) aaaTCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGa > 1:410787/1‑43 (MQ=255) aaTCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTATCgg > 1:1415603/1‑70 (MQ=255) aaTCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTATCgg > 1:1544808/1‑70 (MQ=255) aaTCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTATCgg > 1:1400463/1‑70 (MQ=255) aaTCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTATCgg > 1:1833108/1‑70 (MQ=255) aaTCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTATCgg > 1:2568430/1‑70 (MQ=255) aaTCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCAAGACACCGTAAAACTGGCctgct > 1:2183620/1‑62 (MQ=255) | CGGCAGTAACAGCTCTTCTTCCGATACTCTGAAGCGAAAACCGAGCACCACATAGTGAGTGGTGAAATCCGTGCCAGAGAAGTTATCGTCATAAAAGTGCTGCCAGACACCGTAAAACTGGCCTGCTGTTATCGG > Exported/1334472‑1334606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |