| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 215622 | 46 (0.750) | 38 (1.350) +TTTAATATCAGTAAACCGGACATAACC |
20/46 | NT | 62.3% | coding (732/732 nt) | dnaQ | DNA polymerase III epsilon subunit |
| ? | Exported | 2705182 = | 54 (0.880) | intergenic (+106/‑1) | damX/dam | hypothetical protein/DNA adenine methylase | |||||
Only 100 of 142 total aligned reads displayed.
GATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATGAGAA > Exported/215553‑215691 | gATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAt > 1:2385795‑M1/1‑70 (MQ=255) ttGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAttt < 1:3025739‑M1/71‑4 (MQ=255) ttGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAttt < 1:3093770‑M1/71‑4 (MQ=255) ttGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAttt < 1:2262444‑M1/71‑4 (MQ=255) ttGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtt < 1:1412759‑M1/70‑3 (MQ=255) ttGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAAt < 1:2725144/70‑1 (MQ=255) gCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaa > 1:2032740‑M1/1‑66 (MQ=255) aGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaa < 1:2567993‑M1/69‑6 (MQ=255) aGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCtg < 1:2071531/71‑1 (MQ=255) cTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatc < 1:159459‑M1/71‑10 (MQ=255) cTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCtgt > 1:1216799/1‑70 (MQ=255) cTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCtgt > 1:58179/1‑70 (MQ=255) tCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatat > 1:2273717‑M1/1‑61 (MQ=255) aTGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcag > 1:3266555‑M1/1‑59 (MQ=255) aTGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcag > 1:2524615‑M1/1‑59 (MQ=255) aTGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGaa < 1:3394073/70‑1 (MQ=255) aTGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGa < 1:3710698/69‑1 (MQ=255) tGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagta < 1:394418‑M1/71‑14 (MQ=255) tGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAg < 1:634694/71‑1 (MQ=255) aGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGgcg < 1:921534/71‑1 (MQ=255) gCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaacc > 1:3557287‑M1/1‑54 (MQ=255) gCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATAc < 1:77720/58‑1 (MQ=255) gTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggac < 1:2571264‑M1/71‑22 (MQ=255) gTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga > 1:28148‑M1/1‑50 (MQ=255) tctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggaca > 1:90185‑M1/1‑49 (MQ=255) tctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatat < 1:1767250‑M1/57‑9 (MQ=255) ctcGATCTGGTGCAGAAGAAAGGAGGAAGTTGCCTCTGGCGAGCATAAtttaa > 1:520860‑M1/1‑48 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATaaa > 1:2471228/1‑48 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacat > 1:328751‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCtg > 1:1814218/1‑54 (MQ=255) tcGATCAGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCtg > 1:1714881/1‑54 (MQ=255) gATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataac > 1:3107041‑M1/1‑45 (MQ=255) gATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTaaaaa < 1:2297268/68‑1 (MQ=255) gATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTaaaaa < 1:1695739/68‑1 (MQ=255) cTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatca > 1:3359151‑M1/1‑42 (MQ=255) tGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAttt < 1:706725‑M1/41‑4 (MQ=255) agaagaAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaac > 1:903648‑M1/1‑35 (MQ=255) gaagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAg < 1:860315/60‑1 (MQ=255) gaagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGc > 1:1031925/1‑70 (MQ=255) gaagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGc > 1:2593961/1‑70 (MQ=255) gaagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGc > 1:850487/1‑70 (MQ=255) aagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgg < 1:1380493‑M1/52‑20 (MQ=255) aagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgg < 1:3473443‑M1/52‑20 (MQ=255) aagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaac < 1:575058‑M1/49‑17 (MQ=255) aagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaac < 1:1012775‑M1/49‑17 (MQ=255) agaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaa < 1:2931416‑M1/71‑40 (MQ=255) agaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaa > 1:3749336‑M1/1‑32 (MQ=255) agaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaa < 1:1051950‑M1/71‑40 (MQ=255) agaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaa > 1:1528491‑M1/1‑32 (MQ=255) agaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaa < 1:456873‑M1/71‑40 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaat > 1:2751683‑M1/1‑31 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacata < 1:2772242‑M1/55‑25 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacata < 1:1960920‑M1/55‑25 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaa > 1:2852103‑M1/1‑31 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGAtt < 1:3455808/71‑1 (MQ=255) aaaGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTg < 1:451796/63‑1 (MQ=255) aaaGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTg < 1:3791936/63‑1 (MQ=255) aaGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGAtttt < 1:3588671/71‑1 (MQ=255) aGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatat < 1:1318722‑M1/36‑9 (MQ=255) gCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaa < 1:3389011‑M1/63‑38 (MQ=255) ggAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctt > 1:1779631‑M1/1‑24 (MQ=255) gAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttt < 1:1891912‑M1/71‑49 (MQ=255) gAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttt < 1:213371‑M1/71‑49 (MQ=255) aaGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctttt < 1:18323‑M1/71‑50 (MQ=255) aaGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTgcagc > 1:876810/1‑70 (MQ=255) ttGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTg < 1:3254401/63‑1 (MQ=255) tGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATa > 1:1987229/1‑43 (MQ=255) tGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATa > 1:2617442/1‑43 (MQ=255) tGCCTCTGGCAAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctatttt > 1:2793894‑M1/1‑18 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg > 1:3487163‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg > 1:2535574‑M1/1‑17 (MQ=255) ctctGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCaaa < 1:3760918/66‑1 (MQ=255) tctGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtg > 1:3688052‑M1/1‑14 (MQ=255) tctGGCGAGCATAAATACCTGTGAGAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAAc < 1:2680084/66‑1 (MQ=255) tctGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGAtttt < 1:2131556/56‑1 (MQ=255) ctGGCGAGCATAAtttaatatcagtaaaccggacat > 1:2748435‑M1/1‑13 (MQ=255) ctGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACg > 1:270220/1‑66 (MQ=255) tGGCGTGCATAAtttaatatcagtaaaccgtacataacccatgaagaaaaatcgcgcttttt < 1:2873700‑M1/62‑51 (MQ=255) tGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtg < 1:3824866‑M1/69‑58 (MQ=255) tGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtg < 1:2011392‑M1/69‑58 (MQ=255) tGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGa > 1:198525/1‑41 (MQ=255) tGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGa > 1:2693849/1‑66 (MQ=255) ggCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtggg > 1:2727994‑M1/1‑11 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggc < 1:923549‑M1/70‑61 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga > 1:162657‑M1/1‑10 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataa > 1:1297134‑M1/1‑10 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataa > 1:2784060‑M1/1‑10 (MQ=255) gAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcagg < 1:517424‑M1/71‑64 (MQ=255) aGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaa > 1:408674‑M1/1‑7 (MQ=255) aGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaa > 1:2022190‑M1/1‑7 (MQ=255) aGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGAt > 1:3061004/1‑71 (MQ=255) gCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcagggg > 1:2867863‑M1/1‑6 (MQ=255) cATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcaggggg > 1:3418747‑M1/1‑5 (MQ=255) aTAAtttaatatcagtaaaccggacataacccatgaagaa < 1:11290‑M1/40‑37 (MQ=255) aatttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga < 1:810667‑M1/55‑54 (MQ=255) aatttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg < 1:196314‑M1/54‑53 (MQ=255) aatttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg < 1:2073249‑M1/54‑53 (MQ=255) aaaTACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCTATTTTTGCAGCAAACGATTCAAAAGATgaga > 1:2446797/1‑70 (MQ=255) aaaTACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTgcagca > 1:786583/1‑51 (MQ=255) aaTACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATGAGaa < 1:1085368/70‑1 (MQ=255) | GATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATGAGAA > Exported/215553‑215691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |