| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 215622 | 46 (0.750) | 38 (1.350) +TTTAATATCAGTAAACCGGACATAACC |
20/46 | NT | 62.3% | coding (732/732 nt) | dnaQ | DNA polymerase III epsilon subunit |
| ? | Exported | 2705182 = | 54 (0.880) | intergenic (+106/‑1) | damX/dam | hypothetical protein/DNA adenine methylase | |||||
Only 100 of 138 total aligned reads displayed.
CCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > Exported/2705118‑2705251 | ccTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATgaa < 1:2857047/70‑1 (MQ=255)ccTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATgaa < 1:2749473/70‑1 (MQ=255) cagaagaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATgaaga < 1:3630557‑M2/8‑1 (MQ=255) agaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaaaa > 1:1528491‑M2/60‑71 (MQ=255) agaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaaaa < 1:2931416‑M2/12‑1 (MQ=255) agaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaaaa < 1:456873‑M2/12‑1 (MQ=255) agaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaaaa < 1:1051950‑M2/12‑1 (MQ=255) agaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaaaa < 1:1980104‑M2/12‑1 (MQ=255) gaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAAt > 1:2751683‑M2/59‑71 (MQ=255) cgcTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATc < 1:3753353/71‑1 (MQ=255) ggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtt > 1:1779631‑M2/52‑71 (MQ=255) aTGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATgaaga < 1:3136110/59‑1 (MQ=255) tGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGaaaaa > 1:1871255/1‑62 (MQ=255) tGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCttt < 1:2083544/71‑1 (MQ=255) gaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCttt < 1:1358497‑M2/21‑1 (MQ=255) aagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtttt < 1:18323‑M2/22‑1 (MQ=255) cTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCttttt < 1:1113285/71‑1 (MQ=255) cTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCtttt < 1:3200384/70‑1 (MQ=255) tGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCtttttt > 1:3675626/1‑71 (MQ=255) tGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCtttttt > 1:2109853/1‑71 (MQ=255) tGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCtttttt > 1:2108370/1‑71 (MQ=255) ttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATg < 1:2154354‑M2/4‑1 (MQ=255) tgcctctggcaagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtttttt > 1:1799291‑M2/46‑69 (MQ=255) tgcctctggcaagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtatttt > 1:2793894‑M2/46‑69 (MQ=255) tCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTg < 1:1696538/70‑1 (MQ=255) tCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTg > 1:464740/1‑70 (MQ=255) tCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGa < 1:70277/71‑1 (MQ=255) tCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGa < 1:2296414/71‑1 (MQ=255) gcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg > 1:3487163‑M2/45‑69 (MQ=255) gcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg > 1:2535574‑M2/45‑69 (MQ=255) cctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCttttt < 1:2994136‑M2/23‑1 (MQ=255) tctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:3688052‑M2/42‑71 (MQ=255) gCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAACTCGCGCTTTTTTGAAGTgg > 1:2288101/1‑71 (MQ=255) tggcgtgcataatttaatatcagtaaaccgtacataaccCATGAAGAAAAATCGCGCttttt < 1:2873700‑M2/23‑1 (MQ=255) tggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCttttt < 1:49211‑M2/23‑1 (MQ=255) tggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTg < 1:815910‑M2/30‑1 (MQ=255) tggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTg < 1:3824866‑M2/30‑1 (MQ=255) tggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTg < 1:2011392‑M2/30‑1 (MQ=255) ttCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTggg > 1:1737154/1‑69 (MQ=255) ttCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTggg > 1:2016653/1‑69 (MQ=255) gcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGa > 1:162657‑M2/38‑63 (MQ=255) gcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGc < 1:923549‑M2/33‑1 (MQ=255) tctcCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTggg > 1:3341412/1‑68 (MQ=255) gagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgg < 1:1902434‑M2/36‑1 (MQ=255) gagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgg < 1:517424‑M2/36‑1 (MQ=255) gcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgggg > 1:2867863‑M2/34‑71 (MQ=255) ccACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgggg > 1:3689309/1‑71 (MQ=255) ccACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgggg > 1:2934715/1‑71 (MQ=255) cataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAggggg > 1:3418747‑M2/33‑71 (MQ=255) cacaCCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgggg < 1:816422/70‑1 (MQ=255) ataatttaatatcagtaaaccggacataaccCATgaagaa < 1:11290‑M2/9‑1 (MQ=255) ataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc < 1:2807299‑M2/40‑1 (MQ=255) taatttaatatcagtaaaccggacataaccCATGAAGaaaa > 1:2336475‑M2/31‑41 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATc > 1:2277536/1‑44 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGt > 1:2596697/1‑59 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa < 1:2707163/71‑1 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa < 1:1311012/71‑1 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa < 1:610546/71‑1 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa < 1:599540/71‑1 (MQ=255) caGCCGAAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc > 1:1627221/1‑70 (MQ=255) aatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg < 1:2073249‑M2/25‑1 (MQ=255) aatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg < 1:1601272‑M2/25‑1 (MQ=255) aatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGa < 1:810667‑M2/26‑1 (MQ=255) aGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa < 1:923701/70‑1 (MQ=255) gCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgg > 1:3856671/1‑64 (MQ=255) tttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCaa < 1:1365260‑M2/42‑1 (MQ=255) tttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAg > 1:2235067‑M2/28‑70 (MQ=255) ccGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCaa > 1:2697885/1‑69 (MQ=255) ccGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAg > 1:1381026/1‑70 (MQ=255) taatatcagtaaaccggacataaccCATGAAGAAAAAt > 1:1536020‑M2/26‑38 (MQ=255) taatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTgg < 1:2400515‑M2/31‑1 (MQ=255) atatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtttttt > 1:614515‑M2/24‑47 (MQ=255) tcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc > 1:3184169‑M2/21‑70 (MQ=255) tcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc < 1:2377271‑M2/50‑1 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGaa > 1:1074871‑M2/19‑45 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGaa > 1:58998‑M2/19‑45 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGaa > 1:1888002‑M2/19‑45 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGaa > 1:1401127‑M2/19‑45 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGaa > 1:2707540‑M2/19‑45 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGaa > 1:3421833‑M2/19‑45 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGaa > 1:1319880‑M2/19‑45 (MQ=255) tAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTg < 1:3663586/40‑1 (MQ=255) tAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTg < 1:2638010/40‑1 (MQ=255) tAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTg < 1:2192531/40‑1 (MQ=255) tAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTg < 1:1920878/40‑1 (MQ=255) tAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc < 1:256940/55‑1 (MQ=255) cggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgatga > 1:2778029‑M2/12‑71 (MQ=255) cggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgatga < 1:17223‑M2/60‑1 (MQ=255) cggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgatga > 1:1076401‑M2/12‑71 (MQ=255) ggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGcttgatat > 1:2070157‑M2/11‑68 (MQ=255) tagtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGatat > 1:1121449/1‑70 (MQ=255) ataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATAtt > 1:3460696‑M2/7‑70 (MQ=255) agtCAGCATGAAGAAAAATGGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATAtt > 1:1198346/1‑70 (MQ=255) agtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATAtt > 1:1187605/1‑70 (MQ=255) tCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTaa < 1:2903521/70‑1 (MQ=255) accCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAAc > 1:3301048‑M2/4‑71 (MQ=255) aGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACg < 1:3555416/71‑1 (MQ=255) aGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACg > 1:714576/1‑71 (MQ=255) cCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACgg > 1:33706‑M2/2‑71 (MQ=255) cATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTaaa > 1:3203490/1‑67 (MQ=255) | CCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > Exported/2705118‑2705251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |