New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported 436259 =48 (0.780)66 (1.170) 29/92 NT 63.7% intergenic (‑156/‑29) ybfF/seqA conserved hypothetical protein/regulatory protein for replication initiation
?Exported = 2706018 31 (0.550)coding (836/837 nt) dam DNA adenine methylase

Only 100 of 138 total aligned reads displayed.

GCACACGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGCCCG  >  Exported/2705949‑2706086
                                                                     |                                                                    
gCACACGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAa                                                                     <  1:1060937‑M2/71‑2 (MQ=255)
gCACACGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAa                                                                     >  1:770707‑M2/1‑70 (MQ=255)
  acacGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAatt                                                                   <  1:1475844‑M2/71‑4 (MQ=255)
    acGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattc                                                                  <  1:3008721‑M2/70‑5 (MQ=255)
      gTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagc                                                               <  1:3679034‑M2/71‑8 (MQ=255)
      gTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagc                                                               <  1:1239103‑M2/71‑8 (MQ=255)
        aaaaaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagct                                                              <  1:3020472‑M2/70‑9 (MQ=255)
        aaaaaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagct                                                              <  1:2038677‑M2/70‑9 (MQ=255)
        aaaaaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAg                                                             >  1:2063134/1‑71 (MQ=255)
         aaaaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagct                                                              <  1:3762677‑M2/69‑9 (MQ=255)
         aaaaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAg                                                             >  1:2527292/1‑70 (MQ=255)
           aaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaaga                                                          >  1:3111100‑M2/1‑59 (MQ=255)
           aaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaaga                                                          <  1:1921761‑M2/71‑13 (MQ=255)
           aaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaaga                                                          <  1:3489185‑M2/71‑13 (MQ=255)
           aaGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAgg                                                            <  1:2911281/69‑1 (MQ=255)
              gTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacac                                                       >  1:1187838‑M2/1‑56 (MQ=255)
                  aCGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagct                                                              >  1:762306‑M2/1‑52 (MQ=255)
                  aCGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAgg                                                            <  1:1447437/62‑1 (MQ=255)
                   cGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcac                                                  <  1:1657033‑M2/71‑21 (MQ=255)
                   cGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaa                                                            <  1:1581945‑M2/61‑11 (MQ=255)
                   cGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaa                                                            <  1:3392896‑M2/61‑11 (MQ=255)
                     aaCTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGAGGATGa                                                <  1:1448530/71‑1 (MQ=255)
                       ctgctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattc                                                                  <  1:1553849‑M2/51‑5 (MQ=255)
                       ctgctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCaa                                                              <  1:1033673/55‑1 (MQ=255)
                         gctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaaga                                                          <  1:1652960‑M2/57‑13 (MQ=255)
                         gctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaag                                                           <  1:265870‑M2/56‑12 (MQ=255)
                         gctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAa                                                                     <  1:2476429‑M2/46‑2 (MQ=255)
                         gctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAa                                                                     <  1:3426311‑M2/46‑2 (MQ=255)
                          ctgGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacac                                                       <  1:3119796‑M2/59‑16 (MQ=255)
                             gCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaa                                          >  1:378735‑M2/1‑41 (MQ=255)
                             gCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaa                                          >  1:1288448‑M2/1‑41 (MQ=255)
                             gCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaa                                          >  1:3466894‑M2/1‑41 (MQ=255)
                             gCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaa                                          >  1:1582643‑M2/1‑41 (MQ=255)
                               tttGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagct                                                              >  1:948464‑M2/1‑39 (MQ=255)
                                 tGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt                                      <  1:694604/69‑1 (MQ=255)
                                  gTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaa                                    >  1:1226192‑M2/1‑36 (MQ=255)
                                  gTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaa                                    >  1:3687833‑M2/1‑36 (MQ=255)
                                  gTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGa                                    <  1:3453684/70‑1 (MQ=255)
                                   tACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAatt                                                                   >  1:3601504‑M2/1‑35 (MQ=255)
                                   tACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAatt                                                                   >  1:850443‑M2/1‑35 (MQ=255)
                                   tACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAat                                                                    <  1:2976529‑M2/37‑3 (MQ=255)
                                     cAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGgag                                                          >  1:3268797/1‑45 (MQ=255)
                                     cAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGgag                                                          >  1:1714033/1‑45 (MQ=255)
                                     cAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGa                                                <  1:1840397/55‑1 (MQ=255)
                                     cAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGa                                                <  1:2012400/55‑1 (MQ=255)
                                     cAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGa                                                <  1:3857073/55‑1 (MQ=255)
                                            ggAGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaag                         >  1:2339178‑M2/1‑26 (MQ=255)
                                              aGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagtt                       >  1:2380299‑M2/1‑24 (MQ=255)
                                              aGTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagtt                       >  1:1424010‑M2/1‑24 (MQ=255)
                                              aGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAAt                       <  1:2298940/71‑1 (MQ=255)
                                               gTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagtt                       <  1:3608947‑M2/70‑48 (MQ=255)
                                               gTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagtt                       <  1:3047994‑M2/70‑48 (MQ=255)
                                               gTCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggat                                             <  1:1754569‑M2/48‑26 (MQ=255)
                                               gTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCg                                                     >  1:578930/1‑40 (MQ=255)
                                               gTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGa                                                   >  1:1292582/1‑42 (MQ=255)
                                                tCGTTTCACCCGCGAAAAAATAattcagctaagacacttcactggattaagatgaaaacgattgaagttga                     <  1:3073717‑M2/71‑50 (MQ=255)
                                                tCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttga                     >  1:3218480‑M2/1‑22 (MQ=255)
                                                tCGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagtt                       >  1:2484790‑M2/1‑22 (MQ=255)
                                                 cGTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgat                    <  1:1672807‑M2/71‑51 (MQ=255)
                                                  gTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgat                    <  1:2768431‑M2/70‑51 (MQ=255)
                                                  gTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgat                    <  1:897685‑M2/70‑51 (MQ=255)
                                                  gTTTCACCCGCGAAAAAATAattcagctaagacactgcactggattaa                                          <  1:3161979‑M2/48‑29 (MQ=255)
                                                  gTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCACCTCAATTCTg                   >  1:3837229/1‑71 (MQ=255)
                                                    ttCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgat                 <  1:2880513‑M2/71‑54 (MQ=255)
                                                    ttCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTc                          <  1:3795046/62‑1 (MQ=255)
                                                     tCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatga                  <  1:1726543‑M2/69‑53 (MQ=255)
                                                     tCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatg                   <  1:1189736‑M2/68‑52 (MQ=255)
                                                     tCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatg                   <  1:1185330‑M2/68‑52 (MQ=255)
                                                     tCACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatg                   <  1:2061715‑M2/68‑52 (MQ=255)
                                                     tCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCg                >  1:958526/1‑71 (MQ=255)
                                                     tCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCg                >  1:2419154/1‑71 (MQ=255)
                                                      cACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatg                >  1:3234110‑M2/1‑16 (MQ=255)
                                                      cACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatg                <  1:425644‑M2/70‑55 (MQ=255)
                                                      cACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaa                                  <  1:3497707‑M2/52‑37 (MQ=255)
                                                      cACCCGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaa                                  <  1:441532‑M2/52‑37 (MQ=255)
                                                       aCCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt                                      >  1:604774/1‑47 (MQ=255)
                                                       aCCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTAttt                                      >  1:3279848/1‑47 (MQ=255)
                                                         ccGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaact            >  1:693062‑M2/1‑13 (MQ=255)
                                                         ccGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaact            <  1:2634850‑M2/71‑59 (MQ=255)
                                                         ccGCGAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaact            <  1:2697972‑M2/71‑59 (MQ=255)
                                                           gcgAAAAAATAattcagctaagccactgcactggattaagatgaaaacgattgaagttgatgatgaactc           <  1:29244‑M2/70‑60 (MQ=255)
                                                           gcgAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactc           <  1:2221739‑M2/70‑60 (MQ=255)
                                                           gcgAAAAAATAattcagctaagacactgcactggattaagatgaaaacga                               <  1:1132361‑M2/50‑40 (MQ=255)
                                                           gcgAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGAt          >  1:2170280/1‑71 (MQ=255)
                                                            cgAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactcta         <  1:3222361‑M2/71‑62 (MQ=255)
                                                            cgAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactcta         <  1:3111756‑M2/71‑62 (MQ=255)
                                                             gAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactcta         <  1:3041188‑M2/70‑62 (MQ=255)
                                                             gAAAAAATAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactcta         <  1:634147‑M2/70‑62 (MQ=255)
                                                             gAAAAAATAattcagctaagacactgcactggattaagatg                                      >  1:393072‑M2/1‑9 (MQ=255)
                                                               aaaaaTAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatg                >  1:431175‑M2/1‑7 (MQ=255)
                                                               aaaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTc                          <  1:1353589/51‑1 (MQ=255)
                                                               aaaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTg      >  1:881176/1‑71 (MQ=255)
                                                                aaaaTAattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaa              <  1:3134492‑M2/62‑57 (MQ=255)
                                                                aaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTc                          >  1:1482782/1‑50 (MQ=255)
                                                                aaaaTAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGc     >  1:3760519/1‑71 (MQ=255)
                                                                  aataattcagctaagacactgcactggattaagatgaaaacgattgaagttgatgatgaactctacagcta   >  1:601826‑M2/1‑4 (MQ=255)
                                                                    taattcagctaagacactgcactggattaagatgaaaacgatt                             <  1:2159777‑M2/43‑42 (MQ=255)
                                                                    taattcagctaagacactgcactggattaagatgaaaacgatt                             <  1:2090705‑M2/43‑42 (MQ=255)
                                                                    taattcagctaagacactgcactggattaagatgaaaacgat                              <  1:3671894‑M2/42‑41 (MQ=255)
                                                                    taatTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCt                    <  1:2294923/52‑1 (MQ=255)
                                                                     |                                                                    
GCACACGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAATTCTCAAGGAGAAGCGGATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGCCCG  >  Exported/2705949‑2706086

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.