New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported 775766 =40 (0.540)8 (0.120) 4/92 NT 16.9% intergenic (+138/+727) icd/minE isocitrate dehydrogenase, specific for NADP+/cell division topological specificity factor
?Exported 775793 = 42 (0.620)intergenic (+165/+700) icd/minE isocitrate dehydrogenase, specific for NADP+/cell division topological specificity factor

TAACGAGCGTCCGCCAGCAATAATAAAAAGCTAAGGAATATCTATGTGGGAGACTAGTAGTAGAACTACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/775837‑775766
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATTGATT  >  Exported/775793‑775859
                                                                                                                                           
TAACGAGCGTCCGCCAGCAATAATAAAAAGCTAAGGAATATCTATGTGGGAGACTAGTAGTAGAACTACCA                                                                      >  1:1257094/1‑71
                 CAATAATAAAAAGCTAAGGAATATCTATGTGGGAGACTAGTAGTAGAACTACCAC                                                                     >  1:3280358/1‑55
                        AAAAAGCTAAGGAATATCTATGTGGGAGACTAGTAGTAGAACTACC                                                                       <  1:983045/46‑1
                                AAGGAATATCTATGTGGGAGACTAGTATTAGAACTACC                                                                       <  1:599775/38‑1
                                             GTGGGAGACTAGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGC                              <  1:446836/66‑1
                                             GTGGGAGACTAGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTA                                            <  1:2174493/52‑1
                                             GTGGGAGACTAGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTA                                            <  1:3643597/52‑1
                                                       AGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCG                                   <  1:1004273/51‑1
                                                       AGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCG                                   <  1:1932506/51‑1
                                                       AGTAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCG                                   <  1:4615608/51‑1
                                                         TAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGA                                 >  1:777667/1‑51
                                                         TAGTAGAACTACCACATAGATATTCCTTAGCTTTTTATTATTGCTGG                                     >  1:919908/1‑47
                                                                    CCACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATTGATT  <  1:3896694/71‑1
                                                                      ACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATTGATT  >  1:1290308/1‑69
                                                                      ACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATT      >  1:1054182/1‑65
                                                                      ACATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATT      >  1:4374778/1‑65
                                                                                                                                           
TAACGAGCGTCCGCCAGCAATAATAAAAAGCTAAGGAATATCTATGTGGGAGACTAGTAGTAGAACTACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/775837‑775766
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacATAGATATTCCTTAGCTTTTTATTATTGCTGGCGGACGCTCGTTAATATTTAAGGTCTTCATTGATT  >  Exported/775793‑775859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.