New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported = 108364760 (0.810)5 (0.080) 3/88 NT 8.2% coding (259/1413 nt) pykF pyruvate kinase I
?Exported = 1083662 59 (0.910)coding (274/1413 nt) pykF pyruvate kinase I

Only 100 of 114 total aligned reads displayed.

CTGCTTGATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTA  >  Exported/1083578‑1083717
                                                                     |                                                                      
cTGCTTGATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGc                                                                       >  1:702568/1‑71 (MQ=255)
   cTTGATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTgg                                                                    <  1:1535958/71‑1 (MQ=255)
   cTTGATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTgg                                                                    >  1:3361814/1‑71 (MQ=255)
   cTTGATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTg                                                                     >  1:448755/1‑70 (MQ=255)
    ttGATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGt                                                                   >  1:1552956/1‑71 (MQ=255)
      gATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGt                                                                   <  1:587937/69‑1 (MQ=255)
       aTACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAg                                                                <  1:1390865/71‑1 (MQ=255)
         aCCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGa                                                               >  1:2889060/1‑70 (MQ=255)
          ccAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAg                                                                <  1:725676/68‑1 (MQ=255)
            aaaGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTg                                                                     >  1:839233/1‑61 (MQ=255)
             aaGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGt                                                                   >  1:3436531/1‑62 (MQ=255)
             aaGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCttt                                                          <  1:2374217/71‑1 (MQ=255)
             aaGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCttt                                                          <  1:4649393/71‑1 (MQ=255)
             aaGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCttt                                                          <  1:1628692/71‑1 (MQ=255)
                gTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGtaaaggtctgaccagct                                                       >  1:2576591‑M1/1‑54 (MQ=255)
                gTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGtaaaggtctgaccagct                                                       >  1:908766‑M1/1‑54 (MQ=255)
                   cGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAc                                                        <  1:3097264‑M2/67‑2 (MQ=255)
                     gAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                  <  1:579290/71‑1 (MQ=255)
                     gAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                  <  1:75574/71‑1 (MQ=255)
                         tCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTActtt                                                     >  1:3588061‑M2/1‑60 (MQ=255)
                         tCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTActtt                                                     >  1:1805368‑M2/1‑60 (MQ=255)
                         tCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTActtt                                                     >  1:4565879‑M2/1‑60 (MQ=255)
                         tCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGGCAGACCTTTACTTTCACCACt                                              <  1:3118747/71‑1 (MQ=255)
                          ccGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACt                                              >  1:3860143/1‑70 (MQ=255)
                          ccGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACt                                              >  1:117469/1‑70 (MQ=255)
                           cGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGa                                            <  1:3135782/71‑1 (MQ=255)
                           cGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGa                                            >  1:2537700/1‑71 (MQ=255)
                            gCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGtaaaggtctgaccagctttca                                                   <  1:2932939‑M1/63‑22 (MQ=255)
                             cACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAct                                                       >  1:2650325‑M2/1‑56 (MQ=255)
                             cACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAct                                                       >  1:4680314‑M2/1‑56 (MQ=255)
                             cACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAct                                                       >  1:788250‑M2/1‑56 (MQ=255)
                             cACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAct                                                       >  1:2830550‑M2/1‑56 (MQ=255)
                             cACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                          <  1:50585/71‑1 (MQ=255)
                             cACCATAAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAct                                                       >  1:2863288‑M2/1‑56 (MQ=255)
                              aCCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGtaaaggtctgaccagctttcaga                                                 >  1:727963‑M1/1‑40 (MQ=255)
                              aCCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGtaaaggtct                                                               >  1:1371066‑M1/1‑40 (MQ=255)
                              aCCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                          <  1:2355085/70‑1 (MQ=255)
                              aCCATGAAACTGGAAGGCGGTAACGACGTGTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                          <  1:218801/70‑1 (MQ=255)
                                cATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAAt                                       <  1:2055036/71‑1 (MQ=255)
                                  tGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                  <  1:3697434/58‑1 (MQ=255)
                                  tGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCt                                     >  1:2388335/1‑71 (MQ=255)
                                  tGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCt                                     >  1:3464729/1‑71 (MQ=255)
                                    aaaCTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGt                                   >  1:2973367/1‑71 (MQ=255)
                                    aaaCTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGt                                   >  1:560366/1‑71 (MQ=255)
                                        tGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATc                               >  1:3859976/1‑71 (MQ=255)
                                         ggAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAc                                                        <  1:1699453‑M2/45‑2 (MQ=255)
                                         ggAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAc                                                        <  1:544915‑M2/45‑2 (MQ=255)
                                          gAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                  >  1:2119673/1‑50 (MQ=255)
                                          gAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                  >  1:4280061/1‑50 (MQ=255)
                                          gAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                  >  1:246076/1‑50 (MQ=255)
                                          gAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCg                              >  1:4520988/1‑70 (MQ=255)
                                           aaGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCgg                             >  1:3998113/1‑70 (MQ=255)
                                           aaGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCgg                             >  1:3838252/1‑70 (MQ=255)
                                           aaGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGc                            <  1:4321634/71‑1 (MQ=255)
                                           aaGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGc                            <  1:1776753/71‑1 (MQ=255)
                                            aGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTg                                    >  1:1646999/1‑62 (MQ=255)
                                            aGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGc                            >  1:4090761/1‑70 (MQ=255)
                                              gCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCTGCAAc                         <  1:1629402/71‑1 (MQ=255)
                                                ggTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCaa                          >  1:756394/1‑68 (MQ=255)
                                                   aaCGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCg                     >  1:3216888/1‑70 (MQ=255)
                                                    tcgacgtTTCTCTGAAAGCTGGTCAGACCTTTActttc                                                    >  1:589067‑M2/2‑33 (MQ=255)
                                                    acgacgTTTCTCTGAAAGCTGGTCAGACCTTTActttc                                                    >  1:4304568‑M2/1‑33 (MQ=255)
                                                     cgacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGaaa                  >  1:1934147/1‑71 (MQ=255)
                                                     cgacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGaaa                  >  1:4629776/1‑71 (MQ=255)
                                                      gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                  >  1:3374282/1‑38 (MQ=255)
                                                      gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                  >  1:497825/1‑38 (MQ=255)
                                                      gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                  >  1:1137558/1‑38 (MQ=255)
                                                      gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                          <  1:1038368/46‑1 (MQ=255)
                                                      gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                          <  1:4050930/46‑1 (MQ=255)
                                                      gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                          <  1:2136140/46‑1 (MQ=255)
                                                      gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAAt                 <  1:736723/71‑1 (MQ=255)
                                                      gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAAt                 <  1:4658036/71‑1 (MQ=255)
                                                       acgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                          <  1:1044071/45‑1 (MQ=255)
                                                        cgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATgg               >  1:2317647/1‑71 (MQ=255)
                                                         gTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGt              <  1:2815501/71‑1 (MQ=255)
                                                           ttCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTg            >  1:2185968/1‑71 (MQ=255)
                                                           ttCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTg            >  1:312121/1‑71 (MQ=255)
                                                              tctGAAAGCTGGTCAGACCTTTActttcagagaaacgtcgttaccgccttccagtttcatggt                 >  1:727963‑M2/1‑23 (MQ=255)
                                                                tGAAAGCTGGTCAGACCTTTActttcagagaaacgtcgttaccgccttccagtttcatggtgc               <  1:2932939‑M2/63‑43 (MQ=255)
                                                                tGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGtt                                  >  1:4724724/1‑44 (MQ=255)
                                                                 gAAAGtaaaggtctgaccagctttcagagaaacgtcgt                                       >  1:737054‑M1/1‑5 (MQ=255)
                                                                 gAAAGtaaaggtctgaccagctttcagagaaacgtcgt                                       >  1:4304568‑M1/1‑5 (MQ=255)
                                                                  aaaGtaaaggtctgaccagctttcagagaaacgtcgttaccgccttccagtttcatggtgcgga            >  1:3588061‑M1/1‑4 (MQ=255)
                                                                  aaaGtaaaggtctgaccagctttcagagaaacgtcgttaccgccttccagtttcatggtgcgga            >  1:1805368‑M1/1‑4 (MQ=255)
                                                                  aaaGCTGGTCAGACCTTTACTTTCACCGCTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAAc     >  1:1389053/1‑71 (MQ=255)
                                                                    aGtaaaggtctgaccagctttcagagaaacgtcgttaccgccttccagttttatggtg                >  1:2863288‑M1/1‑2 (MQ=255)
                                                                    aGtaaaggtctgaccagctttcagagaaacgtcgttaccgccttccagtttcatggtgcggatttccgga    >  1:3219855‑M1/1‑2 (MQ=255)
                                                                    aGtaaaggtctgaccagctttcagagaaacgtcgttaccgccttccagtttcatggtg                >  1:788250‑M1/1‑2 (MQ=255)
                                                                    aGtaaaggtctgaccagctttcagagaaacgtcgttaccgccttccagtttcatggtg                >  1:2650325‑M1/1‑2 (MQ=255)
                                                                    aGtaaaggtctgaccagctttcagagaaacgtcgttaccgccttccagtttcatggtg                >  1:4680314‑M1/1‑2 (MQ=255)
                                                                    aGCTGGTCAGACCTTTActttcagagaaacgtcgttaccgccttccagtttcatggtgcggatttccggac   >  1:908766‑M2/1‑17 (MQ=255)
                                                                    aGCTGGTCAGACCTTTActttcagagaaacgtcgttaccgccttccagtttcatggtgcggatttccggac   >  1:2576591‑M2/1‑17 (MQ=255)
                                                                    aGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTAt                                >  1:3228014/1‑42 (MQ=255)
                                                                     gtaaaggtctgaccagctttcagagaaacgtcgttaccgccttccagtttcatggtgcggatttccg      <  1:3097264‑M1/67‑67 (MQ=255)
                                                                     gtaaaggtctgaccagctttcagagaaacgtcgttaccgccttcc                            <  1:544915‑M1/45‑45 (MQ=255)
                                                                     gtaaaggtctgaccagctttcagagaaacgtcgttaccgccttcc                            <  1:1699453‑M1/45‑45 (MQ=255)
                                                                     gtaaaggtctgaccagctttcagagaaacgtcgttaccgccttcc                            <  1:1468894‑M1/45‑45 (MQ=255)
                                                                     gCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTa  <  1:4230043/71‑1 (MQ=255)
                                                                     gCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTa  >  1:3947153/1‑71 (MQ=255)
                                                                     gCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTa  <  1:2354437/71‑1 (MQ=255)
                                                                     |                                                                      
CTGCTTGATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTA  >  Exported/1083578‑1083717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.