New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported = 108364760 (0.810)5 (0.080) 3/88 NT 8.2% coding (259/1413 nt) pykF pyruvate kinase I
?Exported = 1083662 59 (0.910)coding (274/1413 nt) pykF pyruvate kinase I

Only 100 of 112 total aligned reads displayed.

TCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTA  >  Exported/1083595‑1083731
                                                                   |                                                                     
tCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAct                                                                     >  1:3219855‑M2/1‑68 (MQ=255)
  cGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAc                                                                      <  1:3097264‑M2/67‑2 (MQ=255)
    gAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                <  1:75574/71‑1 (MQ=255)
    gAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                <  1:579290/71‑1 (MQ=255)
        tCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTActtt                                                                   >  1:4565879‑M2/1‑60 (MQ=255)
        tCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTActtt                                                                   >  1:3588061‑M2/1‑60 (MQ=255)
        tCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTActtt                                                                   >  1:1805368‑M2/1‑60 (MQ=255)
        tCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGGCAGACCTTTACTTTCACCACt                                                            <  1:3118747/71‑1 (MQ=255)
         ccGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACt                                                            >  1:3860143/1‑70 (MQ=255)
         ccGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACt                                                            >  1:117469/1‑70 (MQ=255)
          cGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGa                                                          <  1:3135782/71‑1 (MQ=255)
          cGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGa                                                          >  1:2537700/1‑71 (MQ=255)
            cACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAct                                                                     >  1:2830550‑M2/1‑56 (MQ=255)
            cACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAct                                                                     >  1:4680314‑M2/1‑56 (MQ=255)
            cACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAct                                                                     >  1:788250‑M2/1‑56 (MQ=255)
            cACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                                        <  1:50585/71‑1 (MQ=255)
            cACCATAAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAct                                                                     >  1:2863288‑M2/1‑56 (MQ=255)
             aCCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                                        <  1:2355085/70‑1 (MQ=255)
               cATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAAt                                                     <  1:2055036/71‑1 (MQ=255)
                 tGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                <  1:3697434/58‑1 (MQ=255)
                 tGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCt                                                   >  1:3464729/1‑71 (MQ=255)
                 tGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCt                                                   >  1:2388335/1‑71 (MQ=255)
                   aaaCTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGt                                                 >  1:560366/1‑71 (MQ=255)
                   aaaCTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGt                                                 >  1:2973367/1‑71 (MQ=255)
                       tGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATc                                             >  1:3859976/1‑71 (MQ=255)
                       tGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATc                                             >  1:4200222/1‑71 (MQ=255)
                        ggAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAc                                                                      <  1:544915‑M2/45‑2 (MQ=255)
                        ggAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTAc                                                                      <  1:1699453‑M2/45‑2 (MQ=255)
                         gAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                >  1:4280061/1‑50 (MQ=255)
                         gAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                >  1:246076/1‑50 (MQ=255)
                         gAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                >  1:1745462/1‑50 (MQ=255)
                         gAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                >  1:2119673/1‑50 (MQ=255)
                         gAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCg                                            >  1:4520988/1‑70 (MQ=255)
                          aaGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCgg                                           >  1:3838252/1‑70 (MQ=255)
                          aaGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCgg                                           >  1:3998113/1‑70 (MQ=255)
                          aaGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGc                                          <  1:4321634/71‑1 (MQ=255)
                          aaGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGc                                          <  1:1776753/71‑1 (MQ=255)
                           aGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTg                                                  >  1:1646999/1‑62 (MQ=255)
                           aGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGc                                          >  1:4090761/1‑70 (MQ=255)
                             gCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCTGCAAc                                       <  1:1629402/71‑1 (MQ=255)
                             gCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAAc                                       <  1:2147666/71‑1 (MQ=255)
                               ggTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCaa                                        >  1:756394/1‑68 (MQ=255)
                                 tAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCg                                   <  1:3755247/71‑1 (MQ=255)
                                  aaCGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCg                                   >  1:3216888/1‑70 (MQ=255)
                                   acgacgTTTCTCTGAAAGCTGGTCAGACCTTTActttc                                                                  >  1:737054‑M2/1‑33 (MQ=255)
                                    cgacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGaaa                                >  1:4629776/1‑71 (MQ=255)
                                     gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                >  1:497825/1‑38 (MQ=255)
                                     gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                >  1:472950/1‑38 (MQ=255)
                                     gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                >  1:1137558/1‑38 (MQ=255)
                                     gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTcac                                                                >  1:3374282/1‑38 (MQ=255)
                                     gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                                        <  1:4050930/46‑1 (MQ=255)
                                     gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                                        <  1:1038368/46‑1 (MQ=255)
                                     gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                                        <  1:2136140/46‑1 (MQ=255)
                                     gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAAt                               <  1:4658036/71‑1 (MQ=255)
                                     gacgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAAt                               <  1:736723/71‑1 (MQ=255)
                                      acgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATa                                                        <  1:1044071/45‑1 (MQ=255)
                                       cgTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATgg                             >  1:2317647/1‑71 (MQ=255)
                                        gTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGt                            <  1:2815501/71‑1 (MQ=255)
                                          ttCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGaa                                 <  1:2451478/64‑1 (MQ=255)
                                          ttCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTg                          >  1:312121/1‑71 (MQ=255)
                                          ttCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTg                          >  1:2185968/1‑71 (MQ=255)
                                             tctGAAAGCTGGTCAGACCTTTActttcagagaaacgtcgttaccgccttccagtttcatggt                               >  1:727963‑M2/1‑23 (MQ=255)
                                               tGAAAGCTGGTCAGACCTTTActttcagagaaacgtcgttaccgccttccagtttcatggtgc                             <  1:2932939‑M2/63‑43 (MQ=255)
                                               tGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGtt                                                >  1:4724724/1‑44 (MQ=255)
                                               tGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGtt                                                >  1:3053956/1‑44 (MQ=255)
                                                 aaaGCTGGTCAGACCTTTACTTTCACCGCTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAAc                   >  1:1389053/1‑71 (MQ=255)
                                                   aGCTGGTCAGACCTTTActttcagagaaacgtcgttaccgccttccagtttcatggtgcggatttccggac                 >  1:2576591‑M2/1‑17 (MQ=255)
                                                   aGCTGGTCAGACCTTTActttcagagaaacgtcgttaccgccttccagtttcatggtgcggatttccggac                 >  1:908766‑M2/1‑17 (MQ=255)
                                                   aGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTAt                                              >  1:3228014/1‑42 (MQ=255)
                                                    gCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTa                <  1:4230043/71‑1 (MQ=255)
                                                    gCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTa                <  1:2354437/71‑1 (MQ=255)
                                                        gTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATg              >  1:1292945/1‑69 (MQ=255)
                                                        gTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATg              <  1:3984375/69‑1 (MQ=255)
                                                           aGACCTTTActttcagagaaacgtcgttaccgccttccagtttcatggt                               >  1:1371066‑M2/1‑9 (MQ=255)
                                                           aGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGaaa                                >  1:2045238/1‑48 (MQ=255)
                                                           aGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGaaa                                >  1:4193093/1‑48 (MQ=255)
                                                           aGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGt         >  1:170691/1‑71 (MQ=255)
                                                           aGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGt         <  1:485142/71‑1 (MQ=255)
                                                            gACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGa                                  <  1:2778246/45‑1 (MQ=255)
                                                            gACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGa                                  <  1:2459162/45‑1 (MQ=255)
                                                            gACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGa                                  <  1:821249/45‑1 (MQ=255)
                                                             aCCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAg                                     <  1:2050520/41‑1 (MQ=255)
                                                             aCCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGttt       <  1:1641315/71‑1 (MQ=255)
                                                             aCCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGttt       <  1:4334706/71‑1 (MQ=255)
                                                               cTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCg                                   >  1:4592496/1‑41 (MQ=255)
                                                                tttACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAAc                   <  1:4258456/56‑1 (MQ=255)
                                                                tttACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAAc                   <  1:4252845/56‑1 (MQ=255)
                                                                tttACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAAc                   <  1:1381721/56‑1 (MQ=255)
                                                                 ttACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGttt       <  1:2060057/67‑1 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATTGTTGCGGTaa                    >  1:313742/1‑53 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTaa                    >  1:4248565/1‑53 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTaa                    >  1:3592802/1‑53 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAgg          >  1:4087775/1‑63 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGttt       >  1:4148964/1‑66 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGttt       >  1:4122245/1‑66 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGttt       >  1:3098867/1‑66 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCacta  >  1:4441014/1‑71 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCac    <  1:4280199/69‑1 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCac    <  1:4215878/69‑1 (MQ=255)
                                                                  tACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGAGGTAACGTATGAAgg          >  1:1007224/1‑63 (MQ=255)
                                                                   |                                                                     
TCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTA  >  Exported/1083595‑1083731

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.