| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 43749 = | 59 (1.000) | 3 (0.060) | 3/88 | NT | 5.8% | coding (265/1332 nt) | yaaU | predicted transporter |
| ? | Exported | 43775 = | 46 (0.900) | coding (291/1332 nt) | yaaU | predicted transporter | |||||
CCCGCATCACCAACAGTTCGACGGGGGATGAAACAAACATCGTCGCCACCGATATCACGCCGATGGCGATGATATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/43824‑43749‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatatcGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATC > Exported/43775‑43844 CCCGCATCACCAACAGTTCGACTGGGGATGAAACAAACATCGTCGCCACCGATATCACGCCGATGGCGAT < 1:1463632/70‑1CCCGCATCACCAACAGTTCGACGGGGGATGAAACAAACATCGTCGCCACCGATATCACGCCGATGGCGAT < 1:3083768/70‑1 CCGCATCACCAACAGTTCGACGGGGGATGAAACAAACATCGTCGCCACCGATATCACGCCGATGGCGATGA < 1:1894066/71‑1 GCATCACCAACAGTTCGACGGGGGATGAAACAAACATCGTCGCCACCGATATCACGCCGATGGCGATGATA > 1:1249785/1‑71 GCATCACCAACAGTTCGACGGGGGATGAAACAAACATCGTCGCCACCGATATCACGCCGATGGCGATGATA > 1:1451590/1‑71 GCATCACCAACAGTTCGACGGGGGATGAAACAAACATCGTCGCCACCGATATCACGCCGATGGCGATGATA > 1:1613807/1‑71 GCATCACCAACAGTTCGACGGGGGATGAAACAAACATCGTCGCCACCGATATCACGCCGATGGCGATGATA > 1:1708834/1‑71 ATCACCAACAGTTCGACGGTGGATGAAACAAACATCGTCGCCACCGATATCACGCCGATGGCGATGATAT > 1:1982868/1‑70 AAACATCGTCGCCACCGATATCACGCCGATGGCGATG > 1:246623/1‑37 ATATCACGCCGATGGCGATGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATG > 1:1248179/1‑71 TATCACGCCGATGGCGATGATATCGGTGGCGACGATGTTTG < 1:3669942/41‑1 CACGCCGATGGCGATGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGA < 1:2861701/65‑1 ATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGAGGGTACTAATCGGCATTGT > 1:1531642/1‑71 ATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCA > 1:2697/1‑71 CGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATC > 1:3267012/1‑71 CGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTA > 1:2460668/1‑57 CGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGT < 1:2245155/39‑1 CCCGCATCACCAACAGTTCGACGGGGGATGAAACAAACATCGTCGCCACCGATATCACGCCGATGGCGATGATATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/43824‑43749‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatatcGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATC > Exported/43775‑43844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |