| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 43749 = | 59 (1.000) | 3 (0.060) | 3/88 | NT | 5.8% | coding (265/1332 nt) | yaaU | predicted transporter |
| ? | Exported | 43775 = | 46 (0.900) | coding (291/1332 nt) | yaaU | predicted transporter | |||||
GCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGA > Exported/43679‑43818 | gatgacaatgccgataagtacccgcatcaccaacagttcgacgggggatgaaacaaacatcgtcgccaccg > 1:3267012‑M1/71‑71 (MQ=255) tgacaatgccgataagtacccgcatcaccaacagttcgacgggggatgaaacaaacatcgtcgccaccGat > 1:2697‑M1/69‑71 (MQ=255) acaatgccgattagtaccctcatcaccaacagttcgacgggggatgaaacaaacatcgtcgccaccGatat > 1:1531642‑M1/67‑71 (MQ=255) cGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTg > 1:2826105/1‑65 (MQ=255) cGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATatca > 1:1828088/1‑71 (MQ=255) cGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATatca > 1:625442/1‑71 (MQ=255) cGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATatc < 1:812032/70‑1 (MQ=255) gTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATatcat > 1:1659295/1‑71 (MQ=255) gTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATatca < 1:2196546/70‑1 (MQ=255) gTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATatca < 1:665824/70‑1 (MQ=255) ttGGCACATCGCTGTTTGGTTATATTTCCGATTAAGTCGGACGGCGCAAAATGTTCCTCATTGATatca < 1:1936884/69‑1 (MQ=255) ggCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGat > 1:1597221/1‑63 (MQ=255) gCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGcc < 1:859989/71‑1 (MQ=255) taagtacccgcatcaccaacagttcgacgggggatgaaacaaacatcgtcgccaccg > 1:2460668‑M1/57‑57 (MQ=255) caTCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATc > 1:3272011/1‑71 (MQ=255) caTCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATc > 1:2247832/1‑71 (MQ=255) caTCGCTGTTTGGTTATATTTCCGATAAAGTCGGAAGGCGCAAAATGTTCCTCATTGATATCATCGCCATc > 1:1155699/1‑71 (MQ=255) aTCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGTCGCAAAATGTTCCTCATTGATATCATCGCCATCg < 1:2597744/71‑1 (MQ=255) cGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGc > 1:149743/1‑71 (MQ=255) cGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGc > 1:3375482/1‑71 (MQ=255) catcaccaacagttcgacgggggatgaaacaaacatcgtcgccaccGATATCATCGCCATCGGCGTGatat > 1:1248179‑M1/47‑71 (MQ=255) tcaccaacagttcgacgggggatgaaacaaacatcgtcgccaccGATATCATCGCCATCGGCGTg < 1:2861701‑M1/21‑1 (MQ=255) gTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCg < 1:3100676/71‑1 (MQ=255) atatTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGt < 1:3605868/70‑1 (MQ=255) tatTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGt < 1:2965614/60‑1 (MQ=255) tatTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGt < 1:104303/60‑1 (MQ=255) tatTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTgg > 1:194494/1‑71 (MQ=255) tttCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGatat < 1:3638326/43‑1 (MQ=255) tttCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGatat < 1:621212/43‑1 (MQ=255) tttCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGc < 1:1220323/70‑1 (MQ=255) acagttcgacgggggatgaaacaaacatcgtcgccaccg < 1:2245155‑M1/1‑1 (MQ=255) ttCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcga > 1:971226/1‑71 (MQ=255) ttCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcga > 1:1955554/1‑71 (MQ=255) tCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATatca > 1:330920/1‑43 (MQ=255) tCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATatca > 1:378881/1‑43 (MQ=255) aTAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATc > 1:808012/1‑47 (MQ=255) tAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgt > 1:1958931/1‑71 (MQ=255) cGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg < 1:2188157/68‑1 (MQ=255) cGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg < 1:1884714/68‑1 (MQ=255) cGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg < 1:2079851/68‑1 (MQ=255) cGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg < 1:787855/68‑1 (MQ=255) cGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg < 1:1342831/68‑1 (MQ=255) cGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttg < 1:2937389/68‑1 (MQ=255) cGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATgtttgttt > 1:2927823/1‑71 (MQ=255) aCGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCaa > 1:3469853/1‑70 (MQ=255) cGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATc > 1:2011616/1‑71 (MQ=255) cgcAAAATGTTCCTCATTGATATCATCGCCATCGGCGt < 1:1091925/38‑1 (MQ=255) cgcAAAATGTTCCTCATTGATATCATCGCCATCGGCGt < 1:2071263/38‑1 (MQ=255) gcAAAATGTTCCTCATTGATATCATCGCCATCGGCg < 1:2559239/36‑1 (MQ=255) gcAAAATGTTCCTCATTGATATCATCGCCATCGGCg < 1:123056/36‑1 (MQ=255) gcAAAATGTTCCTCATTGATATCATCGCCATCGGCg < 1:454320/36‑1 (MQ=255) gcAAAATGTTCCTCATTGATATCATCGCCATCGGCg < 1:3492054/36‑1 (MQ=255) gcAAAATGTTCCTCATTGATATCATCGCCATCGGCg < 1:2547264/36‑1 (MQ=255) caaacatcgtcgccaccGATATCATCGCCATCGGCGTGata < 1:3669942‑M1/24‑1 (MQ=255) aaaTGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTc > 1:3305977/1‑71 (MQ=255) aaaTGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTc > 1:202355/1‑71 (MQ=255) aaTGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGcgacga > 1:3692410/1‑50 (MQ=255) aaTGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttgtt > 1:2763917/1‑58 (MQ=255) aaTGTTCCTCATTGAAATCATCGCCATCGGCGTGATATCGGTGGCGACGAtgtttgtt > 1:2002756/1‑58 (MQ=255) tGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTgg > 1:2519435/1‑42 (MQ=255) tGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTc > 1:2078239/1‑68 (MQ=255) tGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTc > 1:1444937/1‑68 (MQ=255) tGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTc > 1:1643438/1‑68 (MQ=255) tGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTCTTTCATCCCCCGTc > 1:329744/1‑68 (MQ=255) ttCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACt > 1:418475/1‑71 (MQ=255) ttCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACt > 1:838889/1‑71 (MQ=255) ccTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTg < 1:647505/70‑1 (MQ=255) ccTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTg < 1:1285535/70‑1 (MQ=255) ccTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGt > 1:3469120/1‑71 (MQ=255) cTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGtt > 1:1624286/1‑71 (MQ=255) cTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGt < 1:3625167/70‑1 (MQ=255) cATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTgg > 1:173430/1‑71 (MQ=255) aTTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTgg < 1:3439742/70‑1 (MQ=255) aTTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGt < 1:1889504/71‑1 (MQ=255) aTTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGt < 1:1783570/71‑1 (MQ=255) tGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGa > 1:1569402/1‑71 (MQ=255) | GCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGA > Exported/43679‑43818 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |