| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 148622 = | 62 (1.050) | 5 (0.100) | 4/88 | NT | 8.7% | coding (1778/2430 nt) | hrpB | predicted ATP‑dependent helicase |
| ? | Exported | 148657 = | 51 (1.000) | coding (1813/2430 nt) | hrpB | predicted ATP‑dependent helicase | |||||
ATCACGGATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCACCGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/148698‑148622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgtcaGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGATAAAGGTTTAAGCGTGCTCAACTG > Exported/148657‑148721 ATCACGGATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGTCTGCACTTTCA > 1:1691985/1‑71ATCACGGATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCA > 1:1050098/1‑71 ACGGATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTTCACTTTCACC < 1:7612/70‑1 ACGGATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCACCG < 1:2773397/71‑1 ACGGATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCACCG < 1:2155438/71‑1 ACGGATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCACC < 1:1927063/70‑1 ACGGATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCACC < 1:2481526/70‑1 GATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCACCGTCA < 1:546252/71‑1 GATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCACCGTCA < 1:2718034/71‑1 CCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCACC < 1:1704333/63‑1 TGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCA > 1:2837203/1‑46 TGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCA > 1:2505999/1‑46 TGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCACCG > 1:364449/1‑46 ACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCA < 1:1203434/39‑1 TTCTGACGGTTTCGCCAGCGGCTGCACTTTCACCGTCAGAAGACGATTTGCATCAGGCGATGCTTAATGG > 1:2204885/1‑70 GACGGTTTCGCCAGCGGCTGCACTTTCACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCC > 1:1696311/1‑71 GACGGTTTCGCCAGCGGCTGCACTTTCACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCC > 1:1422243/1‑71 GGTTTCGCCAGCGGCTGCACTTTCACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGT < 1:911583/70‑1 GCGGCTGCACTTTCACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGATAAAGGTTT < 1:1523612/71‑1 ACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGGTAAAGGTTTAAGCGTGCTCAACT > 1:2122941/1‑71 ACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGATAAAGGTTTAAGCGTGCTCAACT > 1:660423/1‑71 CCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGATAAAGGTTTAAGCGTGCTCAACTG < 1:207730/71‑1 CGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGATAAAGGTTTAAGCGTGCTCAACTG > 1:1642442/1‑70 CGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGATAAAGGTTTAAGCGTGCTCAACTG > 1:1634621/1‑70 CGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGATAAAGGTTTAAGCGTGCTCAACTG > 1:161223/1‑70 CGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCA > 1:2573931/1‑39 AGAAGACGAGTTGCATCAGGCGATGC‑TAATGGCATCCGTGATAAAGGTTT > 1:2660500/1‑50 ATCACGGATGCCATTAAGCATCGCCTGATGCAACTCGTCTTCTGACGGTTTCGCCAGCGGCTGCACTTTCACCGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/148698‑148622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgtcaGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGATAAAGGTTTAAGCGTGCTCAACTG > Exported/148657‑148721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |