| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 148622 = | 62 (1.050) | 5 (0.100) | 4/88 | NT | 8.7% | coding (1778/2430 nt) | hrpB | predicted ATP‑dependent helicase |
| ? | Exported | 148657 = | 51 (1.000) | coding (1813/2430 nt) | hrpB | predicted ATP‑dependent helicase | |||||
TCTGACACTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATC > Exported/148552‑148692 | tCTGACACTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGtt < 1:1985784/71‑1 (MQ=255)tCTGACACTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGtt < 1:2171430/71‑1 (MQ=255) cTGACAATGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGtt > 1:2252/1‑70 (MQ=255) tGACACTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTTCAAATCGGTCAGTTGa > 1:274111/1‑71 (MQ=255) tGACACTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGa > 1:1991547/1‑71 (MQ=255) cagttgagcacgcttaaacctttatcacggatgccattaagcatcgcctgatgcaactcgtcttcTGACgg < 1:207730‑M1/6‑1 (MQ=255) cagttgagcacgcttaaacctttatcacggatgccattaagcatcgcctgatgcaactcgtcttcTGACg > 1:1642442‑M1/66‑70 (MQ=255) cagttgagcacgcttaaacctttatcacggatgccattaagcatcgcctgatgcaactcgtcttcTGACg > 1:1634621‑M1/66‑70 (MQ=255) cagttgagcacgcttaaacctttatcacggatgccattaagcatcgcctgatgcaactcgtcttcTGACg > 1:161223‑M1/66‑70 (MQ=255) cacTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACgg > 1:2387273/1‑71 (MQ=255) agttgagcacgcttaaacctttatcacggatgccattaagcatcgcctgatgcaactcgtcttcTGACGGt > 1:660423‑M1/65‑71 (MQ=255) agttgagcacgcttaaacctttaccacggatgccattaagcatcgcctgatgcaactcgtcttcTGACGGt > 1:2122941‑M1/65‑71 (MQ=255) acTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGt > 1:2849374/1‑71 (MQ=255) acTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGt > 1:735934/1‑71 (MQ=255) cTGTGGAGTGGGATGACGCGCAAGGTACGCTGGAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGt < 1:1334390/70‑1 (MQ=255) gtgGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGa > 1:1220657/1‑70 (MQ=255) ggAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAg > 1:1997164/1‑71 (MQ=255) aGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGaaa < 1:1422693/68‑1 (MQ=255) aGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGaaa < 1:3650137/68‑1 (MQ=255) tGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAg < 1:2110282/67‑1 (MQ=255) tGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAg < 1:2242436/67‑1 (MQ=255) tGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCa < 1:1421445/71‑1 (MQ=255) gATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGtt < 1:231982/53‑1 (MQ=255) tGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGaaa > 1:245954/1‑61 (MQ=255) aaacctttatcacggatgccattaagcatcgcctgatgcaactcgtcttcTGACGGTGAAAGTGCAGCCGc < 1:1523612‑M1/21‑1 (MQ=255) aaacctttatcacggatgccattagcatcgcctgatgcaactcgtcttct > 1:2660500‑M1/50‑50 (MQ=255) aCGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCt < 1:975410/70‑1 (MQ=255) aCGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTg > 1:2113284/1‑71 (MQ=255) cgcgCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGa > 1:171281/1‑56 (MQ=255) cgcgCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGa > 1:938892/1‑56 (MQ=255) cgcgCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGa > 1:1199365/1‑56 (MQ=255) cgcgCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGa > 1:2124186/1‑56 (MQ=255) cgcgCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGa > 1:1203625/1‑56 (MQ=255) cgcgCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTgg > 1:333009/1‑71 (MQ=255) cgcAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGc > 1:1213056/1‑70 (MQ=255) cAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTg < 1:1597724/66‑1 (MQ=255) aGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGc < 1:2198206/62‑1 (MQ=255) aGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAAc > 1:2061446/1‑71 (MQ=255) ggTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAAcc < 1:2246770/71‑1 (MQ=255) acggatgccattaagcatcgcctgatgcaactcgtcttcTGACGGTGAAAGTGCAGCCGCTGGCGAAAcc < 1:911583‑M1/31‑1 (MQ=255) tACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGt < 1:3145204/71‑1 (MQ=255) ggatgccattaagcatcgcctgatgcaactcgtcttcTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTc > 1:1696311‑M1/38‑71 (MQ=255) ggatgccattaagcatcgcctgatgcaactcgtcttcTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTc > 1:1422243‑M1/38‑71 (MQ=255) cGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGaaa < 1:2534739/65‑1 (MQ=255) cGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCa < 1:3097074/71‑1 (MQ=255) gCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTTGCGAAACCGTCag < 1:2851997/71‑1 (MQ=255) gCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCag < 1:2639381/71‑1 (MQ=255) gCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCag < 1:255346/71‑1 (MQ=255) gCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCag < 1:2359495/71‑1 (MQ=255) tgccattaagcatcgcctgatgcaactcgtcttcTGACg > 1:2573931‑M1/35‑39 (MQ=255) cTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGt > 1:3667009/1‑41 (MQ=255) gAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGa < 1:721964/41‑1 (MQ=255) gAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGa < 1:2261519/41‑1 (MQ=255) gAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAACTGCAg > 1:1141053/1‑49 (MQ=255) ccattaagcatcgcctgatgcaaatcgtcttcTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCagaa > 1:2204885‑M1/33‑70 (MQ=255) aaaGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTc < 1:2347615/65‑1 (MQ=255) aaaGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTc < 1:3605395/65‑1 (MQ=255) aaaGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCagaaga < 1:53534/71‑1 (MQ=255) aaaGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCagaa < 1:1679124/69‑1 (MQ=255) aaGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGAc < 1:407314/71‑1 (MQ=255) aaGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGAc > 1:313748/1‑71 (MQ=255) cTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGc < 1:3355312/51‑1 (MQ=255) cTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGc < 1:2407338/51‑1 (MQ=255) gCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTg > 1:3311240/1‑70 (MQ=255) tCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACg < 1:2172537/62‑1 (MQ=255) cGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCAt > 1:272399/1‑69 (MQ=255) ggCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAg > 1:1395071/1‑71 (MQ=255) ggCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAg > 1:2332294/1‑71 (MQ=255) tACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGc > 1:1652050/1‑70 (MQ=255) aCAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGt < 1:1066311/47‑1 (MQ=255) aCAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGt < 1:1265059/47‑1 (MQ=255) aCAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGa > 1:3556644/1‑71 (MQ=255) cAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGAt > 1:2665133/1‑71 (MQ=255) cAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGAt < 1:1927558/71‑1 (MQ=255) aTCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTc > 1:3496170/1‑44 (MQ=255) aTCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTTCATCAGGCGATGCt < 1:1438521/71‑1 (MQ=255) aTCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCt < 1:2280274/71‑1 (MQ=255) aTCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCt < 1:3348184/71‑1 (MQ=255) gTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAAt < 1:3121455/71‑1 (MQ=255) gTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAAt < 1:1196608/71‑1 (MQ=255) gTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAAt < 1:1649398/71‑1 (MQ=255) tCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATg < 1:1030258/71‑1 (MQ=255) cAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGtt > 1:406695/1‑50 (MQ=255) cAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGtt > 1:2506269/1‑50 (MQ=255) aGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAATACGAGTTGCATCAGGc < 1:1299531/58‑1 (MQ=255) aGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGc < 1:1545426/58‑1 (MQ=255) aGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGc < 1:1687942/58‑1 (MQ=255) aGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATgg > 1:2975979/1‑70 (MQ=255) ttGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCAt < 1:2348538/71‑1 (MQ=255) TGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATc < 1:546252‑M1/71‑1 (MQ=255) TGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATc < 1:2718034‑M1/71‑1 (MQ=255) | TCTGACACTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATC > Exported/148552‑148692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |