| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 409429 = | 54 (0.920) | 6 (0.110) | 3/92 | NT | 11.8% | coding (330/582 nt) | rlpB | minor lipoprotein |
| ? | Exported | 409460 = | 41 (0.770) | coding (299/582 nt) | rlpB | minor lipoprotein | |||||
GATCATGACGGTTAATGCGACCGTGTTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/409459‑409429‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCC > Exported/409460‑409528 GATCATGACGGTTAATGCGACCGTGTTGATCATCTGATACTCTGCTGT < 1:3008925/48‑1GATCATGACGGTTAATGCGACCGTGTTGATCATCTGATACTCTGCTGT < 1:3670640/48‑1GATCATGACGGTTAATGCGACCGTGTTGATCATCTGATACTCTGCTGT < 1:1998725/48‑1 CATGACGGTTAATGCGACCGTGTTGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGG > 1:1934258/1‑71 CATGACGGTTAATGCGACCGTGTTGATCATCTGATACTCTGCTGT > 1:244303/1‑45 GACGGTTAATGCGACCGTGTTGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATG < 1:423959/65‑1 TGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTC < 1:3288025/65‑1 TGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTC < 1:3321824/65‑1 TGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTC < 1:2756759/65‑1 TGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGC < 1:2205302/58‑1 TGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGC < 1:1448301/58‑1 TGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGC < 1:1383889/58‑1 TGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGC < 1:3448361/58‑1 TGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGC < 1:598392/58‑1 TGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGC < 1:933106/58‑1 GATCATCTGATACTCTGCTGTTTGACCGTTACGGAA < 1:2634848/36‑1 ATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACC > 1:124775/1‑71 ATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACC > 1:2851660/1‑71 ATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACC > 1:129082/1‑71 ATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACC > 1:1123523/1‑71 ATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCAC > 1:3582414/1‑65 ATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGC < 1:3136063/56‑1 ATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCG > 1:1936686/1‑40 TCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCC < 1:992835/71‑1 CATCCGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCC > 1:1714784/1‑70 GATCATGACGGTTAATGCGACCGTGTTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/409459‑409429‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatcATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCC > Exported/409460‑409528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |