| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 409429 = | 54 (0.920) | 6 (0.110) | 3/92 | NT | 11.8% | coding (330/582 nt) | rlpB | minor lipoprotein |
| ? | Exported | 409460 = | 41 (0.770) | coding (299/582 nt) | rlpB | minor lipoprotein | |||||
CGCCATTTGCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGA > Exported/409360‑409497 | gggtaaagtgagcatcgcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcggatg > 1:1714784‑M1/70‑70 (MQ=255)gggtaaagtgagcatcgcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatga < 1:992835‑M1/2‑1 (MQ=255) ggtaaagtgagcatcgcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatgat > 1:1123523‑M1/69‑71 (MQ=255) ggtaaagtgagcatcgcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatgat > 1:2851660‑M1/69‑71 (MQ=255) ggtaaagtgagcatcgcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatgat > 1:129082‑M1/69‑71 (MQ=255) ggtaaagtgagcatcgcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatgat > 1:124775‑M1/69‑71 (MQ=255) ccATTTGCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCgggg > 1:3569112/1‑68 (MQ=255) ccATTTGCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCgggg > 1:8102/1‑68 (MQ=255) ttGCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAac < 1:973404/70‑1 (MQ=255) tGCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAacac > 1:645957/1‑71 (MQ=255) gtgagcatcgcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatgat > 1:3582414‑M1/63‑65 (MQ=255) gCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACg > 1:2771581/1‑71 (MQ=255) gCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACg > 1:588006/1‑71 (MQ=255) gCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACg > 1:3642971/1‑71 (MQ=255) gCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACg > 1:847167/1‑71 (MQ=255) gCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACg > 1:3430031/1‑71 (MQ=255) gagcatcgcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatGATCa < 1:2756759‑M1/5‑1 (MQ=255) gagcatcgcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatGATCa < 1:3288025‑M1/5‑1 (MQ=255) gagcatcgcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatGATCa < 1:3321824‑M1/5‑1 (MQ=255) cGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACgg > 1:763806/1‑71 (MQ=255) cGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACgg > 1:3713155/1‑71 (MQ=255) cGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACgg > 1:2320396/1‑71 (MQ=255) cGGGTTATCGAAGAACGAACGGAAGACTTAGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAac > 1:1875371/1‑67 (MQ=255) gggTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGt > 1:369605/1‑71 (MQ=255) tCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCAt > 1:1479873/1‑70 (MQ=255) tCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCAt > 1:2675411/1‑70 (MQ=255) gcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatgat < 1:3136063‑M1/3‑1 (MQ=255) gcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatGATCa < 1:1383889‑M1/5‑1 (MQ=255) gcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatGATCa < 1:598392‑M1/5‑1 (MQ=255) gcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatGATCa < 1:2205302‑M1/5‑1 (MQ=255) gcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatGATCa < 1:3448361‑M1/5‑1 (MQ=255) gcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatGATCa < 1:933106‑M1/5‑1 (MQ=255) gcgaaagataccgcatcggtattccgtaacggtcaaacagcagagtatcagatGATCa < 1:1448301‑M1/5‑1 (MQ=255) gaagaaCGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCAt < 1:2586300/68‑1 (MQ=255) gaagaaCGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTaa < 1:1500150/71‑1 (MQ=255) aagaaCGAACGTAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTaa < 1:3556898/70‑1 (MQ=255) aagaaCGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAAc > 1:639448/1‑71 (MQ=255) aagaaCGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAAc > 1:3639245/1‑71 (MQ=255) agaaCGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCAtt < 1:1465490/67‑1 (MQ=255) gaacgaacGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCg > 1:369643/1‑71 (MQ=255) gaacgaacGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCg > 1:2413842/1‑71 (MQ=255) aacgaacgGAAGACTTTGGCGCTAATCGGGTAGTTATCACGGCCGGGGATCAACACGGTCGCAtt < 1:2946641/65‑1 (MQ=255) acgaacgGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCgggg < 1:2304290/47‑1 (MQ=255) acgaacgGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTc < 1:2745868/71‑1 (MQ=255) cgaacgGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCaa < 1:415878/51‑1 (MQ=255) gaacgGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGAt < 1:3277742/47‑1 (MQ=255) ccgcatcggtattccgtaacggtcaaacagcagagtatcagatGATCAACACGGTCGCATTAACCGTCATg > 1:1934258‑M1/44‑71 (MQ=255) acgGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGAt > 1:3641898/1‑45 (MQ=255) acgGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATc > 1:601707/1‑46 (MQ=255) acgGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATg < 1:1932291/70‑1 (MQ=255) catcggtattccgtaacggtcaaacagcagagtatcagatGATCAACACGGTCGCATTAACCGTc < 1:423959‑M1/25‑1 (MQ=255) cggtattccgtaacggtcaaacagcagagtatcagatgat > 1:1936686‑M1/38‑40 (MQ=255) cTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTg < 1:2550923/70‑1 (MQ=255) cTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTg < 1:2686537/70‑1 (MQ=255) tttGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGa > 1:2528903/1‑70 (MQ=255) tttGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGa > 1:1758679/1‑70 (MQ=255) ttccgtaacggtcaaacagcagagtatcagatGATc < 1:2634848‑M1/4‑1 (MQ=255) cTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGt < 1:3259906/50‑1 (MQ=255) cTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGt < 1:757743/50‑1 (MQ=255) aaTCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTctgctg > 1:2163707/1‑71 (MQ=255) aTCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGt > 1:2149464/1‑71 (MQ=255) aTCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGt > 1:2489364/1‑71 (MQ=255) tCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGtt > 1:111015/1‑71 (MQ=255) cGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGttt > 1:1781332/1‑71 (MQ=255) gggTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGttt > 1:3645609/1‑70 (MQ=255) gggTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGttt > 1:3685755/1‑70 (MQ=255) gggTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGttt > 1:1795537/1‑70 (MQ=255) acagcagagtatcagatGATCAACACGGTCGCATTAACCGTCATg > 1:244303‑M1/18‑45 (MQ=255) acagcagagtatcagatGATCAACACGGTCGCATTAACCGTCATGatc < 1:3670640‑M1/31‑1 (MQ=255) acagcagagtatcagatGATCAACACGGTCGCATTAACCGTCATGatc < 1:3008925‑M1/31‑1 (MQ=255) acagcagagtatcagatGATCAACACGGTCGCATTAACCGTCATGatc < 1:1998725‑M1/31‑1 (MQ=255) atttCACGGCCGGGGATCAACACGGTCGGATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGt < 1:174275/67‑1 (MQ=255) tatCACGGCCGGGGATCAACACGGTCGCATTAACCGTc < 1:3537313/38‑1 (MQ=255) tatCACGGCCGGGGATCAACACGGTCGCATTAACCGTc < 1:1489086/38‑1 (MQ=255) tatCACGGCCGGGGATCAACACGGTCGCATTAACCGTc < 1:1669347/38‑1 (MQ=255) atCACGGCCGGGGATCAACACGGTCGCATTAACCGTc < 1:3324986/37‑1 (MQ=255) atCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGAACGTTAc > 1:1186042/1‑71 (MQ=255) tCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATAATCTGCTGTTTGACCGTTACg < 1:1789722/71‑1 (MQ=255) cACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACg > 1:71697/1‑70 (MQ=255) cACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACg > 1:17880/1‑70 (MQ=255) cACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACg > 1:1456370/1‑70 (MQ=255) aCGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACgg < 1:3276541/70‑1 (MQ=255) ggCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGaa > 1:3511420/1‑70 (MQ=255) gCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTctgct > 1:2505405/1‑52 (MQ=255) gCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTctgct > 1:1129018/1‑52 (MQ=255) cGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGttt > 1:2352227/1‑54 (MQ=255) cGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATAcc > 1:2856897/1‑71 (MQ=255) gggATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGa < 1:2783014/71‑1 (MQ=255) gggATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGa < 1:3204504/71‑1 (MQ=255) | CGCCATTTGCGGGTTATCGAAGAACGAACGGAAGACTTTGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGA > Exported/409360‑409497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |