| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 428834 = | 71 (1.200) | 5 (0.090) | 3/92 | NT | 7.6% | coding (1590/1947 nt) | nagE | fused N‑acetyl glucosamine specific PTS enzyme IICBA components |
| ? | Exported | 428867 = | 57 (1.070) | coding (1623/1947 nt) | nagE | fused N‑acetyl glucosamine specific PTS enzyme IICBA components | |||||
GCGTGGTTGGTGTTGAAGATTTTCACGATTGTCCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/428908‑428834‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTTCTGCCTGGAAACCGAAAAAGGCGCG > Exported/428867‑428936 GCGTGGTTGGTGTTGAAGATTTTCACGATTGTCCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTT < 1:12692/71‑1GCGTGGTTGGTGTTGAAGATTTTCACGATTGTCCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTT < 1:1511898/71‑1GCGTGGTTGGTGTTGAAGATTTTCACGATTGTCCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTT < 1:2525900/71‑1 GGTTGGTGTTGAAGATTTTCACGATTGTCCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTTCACC > 1:3217018/1‑71 GGTTGGTGTTGAAGATTTTCACGATTGTCCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTTCACC > 1:2729426/1‑71 AAGATTTTCACGATTGTCCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTTCAC < 1:2459764/59‑1 GATTTTCACGATTGTCCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTTCA > 1:1110854/1‑56 TTTCACGATTGTCCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTT < 1:1054486/51‑1 CCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTTCAC > 1:3118838/1‑42 GGTGATACGACGATTTTATCTGTCGGTTTCACCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAAC > 1:1722688/1‑70 GGTGATACGACGATTTTATCTGTCGGTTTCACCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAAC > 1:3053189/1‑70 TGATACGACGATTTTATCTGTCGGTTTCACCAGCCGCAGGGACAATCGTGAAAAT < 1:409330/55‑1 CGACGATTTTATCTGTCGGTTTCACCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTT < 1:2681112/71‑1 CGACGATTTTATCTGTCGGTTTCACCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTT < 1:1816638/71‑1 TCACCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTTCTGCCTGGAAACCGAAAAAGG < 1:3119083/71‑1 TCACCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTTCTGCCTGGAA < 1:2156230/60‑1 TCACCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTTCTGCCTGGAA < 1:3647348/60‑1 ACCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTTCTGCCTGGAAACCGAAAAAGGC < 1:3397873/70‑1 CCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTTCTGCCTGGAAACCGAAAAAGGCGC > 1:2613502/1‑71 CCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGT < 1:2237260/46‑1 CCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGT < 1:3652777/46‑1 CCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGT < 1:410634/46‑1 CAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTTCTGCCTGGAAACCGAAAAAGGCGCG > 1:2710944/1‑71 GCGTGGTTGGTGTTGAAGATTTTCACGATTGTCCCTGCGGCTGGTGATACGACGATTTTATCTGTCGGTTTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/428908‑428834‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTTCTGCCTGGAAACCGAAAAAGGCGCG > Exported/428867‑428936 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |